Transcript

cast-217

ID

ZDB-TSCRIPT-240508-3415

Name

cast-217 Nomenclature History

Previous Names

None

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

cast (1)

Strain

Non Reference Strain

Genome Resources

Ensembl_Trans:ENSDART00000162426

RNA Central

None

Note

None

Sequence

ENSDART00000162426 [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000162426.2|gene_biotype:protein_coding|ENSDARG00000058693.6 transcript_biotype:protein_coding gene_symbol:cast cdna chromosome:GRCz11:21:11568462:11646878:-1
ATGGGCCAGATCTTCAGCTGGATCCGCGGCACACGCGACC
AACCGGCCCTGCAGGACATCGCAGTAGAGCAACAGTCTCA
GCAGGTCACACCCACCACAACATCTCAGGTCTCCACAGTG
AAACCTGCACAATATGAGAAAGGAGCTACACAATCGTCTA
CAGCAGCTGCGACTGTCAAATCCGGCGCTGGAGATCCTGC
AACCACCCAGAAAGGATCTTCTCAAGTCAAACCTCAGGTC
ACAGATTCTAAATCAACACCTGCATCTTCTGCTAAAGTCT
CAGCTGTGAGCTCTGGGACTGGAGTTGCTGGTACAACCGG
TGGAGCAGGAGTGAAACCAGCAGATCCTGCAAAAGATACG
CCTCAGAGCACCACCATTCCTTCAACCAAACTGGGACCTG
CTAAGGTGGATCCGGCTGCTGGGAAGCCCTCTGGCTCAGC
TGGTGCCCAAAAACAGACAAGTGCTCAAAAGGTGCAGGTT
GAAGTGGGTCCTTCAGCAGCAAAAGTCAGTGCAGATGCTG
ACGATCCGTTTGATGCCCTGTCTGGCACATTACCATCATC
ACAACCTTTGGCTCCTAAAGTCCACTACACTGGACCTGAG
ATCAAAGAGCCCAAACTGAAATCAGAGAAAGGTGTTTTGT
GTGGTGAGCGAGATGACACGCTGCCGCCCGGATACAGAAA
GGAAGACCTGGAAAAGAAGCATGGAGCTGGAGTTCCAGCT
GGAGTTCCGGAGAAGCCTAAAGAAGTTCCCAAGCCCATAA
GCACAGATGATGCACTGGAATCTCTCTCCTCTACGTTTGT
GTCTCCAGCTCAAGCTGCTCCAAAGAAGACAGACGTGAAA
ACTGAAACAATAGGAGCAGTGGATGTTAAATCGGCAGGCA
CCACTAACTTTGCTCCCCCTCCACCATCTCAGCAGAAACA
ACCGGCGTCGTCTCAAGCTGCTGCTGTAACCAAATCACCT
GCTCCACCGGCAGACAAGAAAGCTAAAATGGAGACTCATG
CACAACCAGCCAAAGCAAAGACAGAGTCGGACAGCTCCAT
ATCGCTGGACGCTCTCGATGCTTTGAGCGACACACTGGGG
GCTTCTAAACCACCCCAAAAATTACCAGAACTCAAACCTG
GACAGATAGTTGATGAGAAGAAACAGACCTCAGAGAAAGG
TGTTCGTGTTGGAGAAAGAGACGACACACTTCCACCACAA
TACAGATTCAAAGAGGAAGATCTCAAGAAATATCCTCCAC
CTGCGAAAGAGCCTTCACTGAACACAGATGATGCGATGGA
CATACTTTCAGGAGATTTCACGACCCCTGCATCGGCACCT
GTTGTCAAAGCTCCTGTTCCTCCTGCACAGGACACAAAGA
AGCATGCTGCAGTGCCTGAGAAGACCAAAGATATTCCCAA
GACTAAAGCTGATGCTCTGTCAAGTGATTTCGTGGCTCCG
GCACATTCTGCTCCTAAGGTTTCTTCAGCTGCTCCTAAAA
CCATCCCTCCAGGCCCACCACAAACCCCAGATGAGGATCC
TTTCAGTGCTTTGGGCGACACTCTTTCTGCCCCAGAACCA
CCAAAAAAACAACCTGACCTGAAACCTAAGGACATCGTAC
ATGAGAAGGATGTGACGTCAAAGAAAGGAGTTCGTGTTGG
AGAAAGAGACGACACACTCCCACCAGAATACAGATTCAAA
GAGGAAGATCTCAAGAAATATCCTCCTCCTCAGAAAGATC
CTTCCTTAGATGCTAATGAAGCTCTGGATATTCTGTCTGG
GGATTTTACAACTCCTTCCGCACCATCGGCTGTTTCCCCT
GCCTCTAAATCCTCTGCCAAGTCTTCAGATTCAGCTTTAG
ATGCTCTTGCTGGTGATTTCGTCGCTTCTTCTTCTGCGTC
TTCAGTTCATTCTGCCGTCTCTGGCCCCCCACGCTCCGAC
AGACTGTTGTCAGACGGAACCTCATCAGCTCTAGATGCCC
TGTCAGAAACTCTGGGAGACATTAAAGCAGCCCCTGAACC
CGCCCCTGTCCTACCTAAAACTGTCGTTAAGGAGAAGACG
GTCATAGAAGAGAGAGTGAGTAAACCGGGTGAGAGAGACG
ACTCCCTTCCACCAGATCAGCGGTTCACTGCGGAGGATCG
CAAGGCATTTGAAGAAGCAAAGAAGAAAGACGCCAAACCA
AAACAGCCATCAATGGACGATTCAGCGGCTCTGGACATGT
TGTCTAGTGATTTTTCAGATGTACCGACTGTAAAGCCCAC
TGTATCTGATGGCAAAAGCTTCACCCCTGAACCAACACCA
CCAACCTTTAAGGCAACCGGTCCGGTTTTAGACAAACTGG
CAGACAACGTGCTTTCCAACCTGACTGACCCCAAAGCCAA
AGACAGCAAAGCAAAGGGAAAGGGGGCGAAACCAAAGTCT
AAACCAAAGAAACAGGCAGTGGAAGACTCTTCAGCCACAG
ATCTGCTGTCCAGTAAACCGAGCTCAGATGTGGTGCCTTC
AGCTTCCACAAAGGCTGGAAAAAGATAAATTACAA

Related Transcripts

Transcripts related to cast

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	cast-201 (1) Ensembl	Ensembl	2527 nt	Select Tool ZFIN BLAST
mRNA	cast-202 (1) Ensembl	Havana	710 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-203 (1) Ensembl	Havana	3766 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-204 (1) Ensembl	Havana	1062 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-205 (1) Ensembl	Havana	895 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-207 (1) Ensembl	Havana	729 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-208 (1) Ensembl	Havana	645 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-209 (1) Ensembl	Havana	977 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-211 (1) Ensembl	Havana	462 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-212 (1) Ensembl	Havana	762 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-213 (1) Ensembl	Havana	843 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-214 (1) Ensembl	Havana	398 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-215 (1) Ensembl	Havana	576 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-216 (1) Ensembl	Havana	747 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-217	Ensembl	2515 nt
mRNA	cast-218 (1) Ensembl	Ensembl	2443 nt	Select Tool ZFIN BLAST
mRNA	cast-219 (1) Ensembl	Ensembl	2734 nt	Select Tool ZFIN BLAST
ncRNA	cast-014 (1) Ensembl	Havana	328 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	cast-015 (1) Ensembl	Havana	467 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations