Transcript

cast-215

ID

ZDB-TSCRIPT-091110-283

Name

cast-215 Nomenclature History

Previous Names

cast-012
dkey-184p9.11-008
dkey-184p9.11-012
ottdart00000043580
si:dkey-184p9.11-012

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

cast (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000144770 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000144770.3|gene_biotype:protein_coding|ENSDARG00000058693.6 transcript_biotype:protein_coding gene_symbol:cast cdna chromosome:GRCz11:21:11607752:11632547:-1
GTTGGGCGTGTTCCTGTTAGTATATGCTTGTGTATGTGCA
TGGGGGATATATTTTGATTATTTCAGACTTGAATATTTCA
GGCTCTCTCTTTAAGATTGGATTACAGCTGAAAGTGAAAC
AGGACGCTCTTGGTGTTGTTACAGATGTCTCAGCAGGTCA
CACCCACCACAACATCTCAGGTCTCCACAGTGAAACCTGC
ACAATATGAGGTGCAGGTTGAAGTGGGTCCTTCAGCAGCA
AAAGTCAGTGCAGATGCTGACGATCCGTTTGATGCCCTGT
CTGGCACATTACCATCATCACAACCTTTGGCTCCTAAAGT
CCACTACACTGGACCTGAGATCAAAGAGCCCAAACTGAAA
TCAGAGAAAGGTGTTTTGTGTGGTGAGCGAGATGACACGC
TGCCGCCCGGATACAGAAAGGAAGACCTGGAAAAGAAGCA
TGGAGCTGGAGTTCCAGCTGGAGTTCCGGAGAAGCCTAAA
GAAGTTCCCAAGCCCATAAGCACAGATGATGCACTGGAAT
CTCTCTCCTCTACGTTTGTGTCTCCAGCTCAAGCTGCTCC
AAAGAAGACAGACGTG

OTTDART00000043580 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043580|OTTDARG00000031291|ZDB-GENE-050810-2 cast|OTTDARP00000034552 DKEY-184P9.11-012 LG_none BX005379.9,BX927307.12,BX511081.8 Danio rerio protein_coding KNOWN, 576 bp
GTTGGGCGTGTTCCTGTTAGTATATGCTTGTGTATGTGCA
TGGGGGATATATTTTGATTATTTCAGACTTGAATATTTCA
GGCTCTCTCTTTAAGATTGGATTACAGCTGAAAGTGAAAC
AGGACGCTCTTGGTGTTGTTACAGATGTCTCAGCAGGTCA
CACCCACCACAACATCTCAGGTCTCCACAGTGAAACCTGC
ACAATATGAGGTGCAGGTTGAAGTGGGTCCTTCAGCAGCA
AAAGTCAGTGCAGATGCTGACGATCCGTTTGATGCCCTGT
CTGGCACATTACCATCATCACAACCTTTGGCTCCTAAAGT
CCACTACACTGGACCTGAGATCAAAGAGCCCAAACTGAAA
TCAGAGAAAGGTGTTTTGTGTGGTGAGCGAGATGACACGC
TGCCGCCCGGATACAGAAAGGAAGACCTGGAAAAGAAGCA
TGGAGCTGGAGTTCCAGCTGGAGTTCCGGAGAAGCCTAAA
GAAGTTCCCAAGCCCATAAGCACAGATGATGCACTGGAAT
CTCTCTCCTCTACGTTTGTGTCTCCAGCTCAAGCTGCTCC
AAAGAAGACAGACGTG

Related Transcripts

Transcripts related to cast

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	cast-201 (1) Ensembl	Ensembl	2,527 nt	Select Tool ZFIN BLAST
mRNA	cast-202 (1) Ensembl	Ensembl	710 nt	Select Tool
mRNA	cast-203 (1) Ensembl	Ensembl	3,766 nt	Select Tool
mRNA	cast-204 (1) Ensembl	Ensembl	1,062 nt	Select Tool
mRNA	cast-205 (1) Ensembl	Ensembl	895 nt	Select Tool
mRNA	cast-207 (1) Ensembl	Ensembl	729 nt	Select Tool
mRNA	cast-208 (1) Ensembl	Ensembl	645 nt	Select Tool
mRNA	cast-209 (1) Ensembl	Ensembl	977 nt	Select Tool
mRNA	cast-211 (1) Ensembl	Ensembl	462 nt	Select Tool
mRNA	cast-212 (1) Ensembl	Ensembl	762 nt	Select Tool
mRNA	cast-213 (1) Ensembl	Ensembl	843 nt	Select Tool
mRNA	cast-214 (1) Ensembl	Ensembl	398 nt	Select Tool
mRNA	cast-215	Ensembl	576 nt
mRNA	cast-216 (1) Ensembl	Ensembl	747 nt	Select Tool
mRNA	cast-217 (1) Ensembl	Ensembl	2,515 nt	Select Tool ZFIN BLAST
mRNA	cast-218 (1) Ensembl	Ensembl	2,443 nt	Select Tool ZFIN BLAST
mRNA	cast-219 (1) Ensembl	Ensembl	2,734 nt	Select Tool ZFIN BLAST
ncRNA	cast-014 (1) Ensembl	Ensembl	328 nt	Select Tool
ncRNA	cast-015 (1) Ensembl	Ensembl	467 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations