Transcript

cast-201

ID

ZDB-TSCRIPT-240508-3414

Name

cast-201 Nomenclature History

Previous Names

None

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

cast (1)

Strain

Non Reference Strain

Genome Resources

Ensembl_Trans:ENSDART00000081614

RNA Central

None

Note

None

Sequence

ENSDART00000081614 [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000081614.4|gene_biotype:protein_coding|ENSDARG00000058693.6 transcript_biotype:protein_coding gene_symbol:cast cdna chromosome:GRCz11:21:11568462:11654422:-1
ATGGCGTACGCAATGTATTGGGCGCGCAACAATGGAGACA
CTTCATTTCAAAAACAAGAATACGCTCCACAGACATCAAG
GTTCATGTCTCAGCAGGTCACACCCACCACAACATCTCAG
GTCTCCACAGTGAAACCTGCACAATATGAGAAAGGAGCTA
CACAATCGTCTACAGCAGCTGCGACTGTCAAATCCGGCGC
TGGAGATCCTGCAACCACCCAGAAAGGATCTTCTCAAGTC
AAACCTCAGGTCACAGATTCTAAATCAACACCTGCATCTT
CTGCTAAAGTCTCAGCTGTGAGCTCTGGGACTGGAGTTGC
TGGTACAACCGGTGGAGCAGGAGTGAAACCAGCAGATCCT
GCAAAAGATACGCCTCAGAGCACCACCATTCCTTCAACCA
AACTGGGACCTGCTAAGGTGGATCCGGCTGCTGGGAAGCC
CTCTGGCTCAGCTGGTGCCCAAAAACAGACAAGTGCTCAA
AAGGTGCAGGTTGAAGTGGGTCCTTCAGCAGCAAAAGTCA
GTGCAGATGCTGACGATCCGTTTGATGCCCTGTCTGGCAC
ATTACCATCATCACAACCTTTGGCTCCTAAAGTCCACTAC
ACTGGACCTGAGATCAAAGAGCCCAAACTGAAATCAGAGA
AAGGTGTTTTGTGTGGTGAGCGAGATGACACGCTGCCGCC
CGGATACAGAAAGGAAGACCTGGAAAAGAAGCATGGAGCT
GGAGTTCCAGCTGGAGTTCCGGAGAAGCCTAAAGAAGTTC
CCAAGCCCATAAGCACAGATGATGCACTGGAATCTCTCTC
CTCTACGTTTGTGTCTCCAGCTCAAGCTGCTCCAAAGAAG
ACAGACGTGAAAACTGAAACAATAGGAGCAGTGGATGTTA
AATCGGCAGGCACCACTAACTTTGCTCCCCCTCCACCATC
TCAGCAGAAACAACCGGCGTCGTCTCAAGCTGCTGCTGTA
ACCAAATCACCTGCTCCACCGGCAGACAAGAAAGCTAAAA
TGGAGACTCATGCACAACCAGCCAAAGCAAAGACAGAGTC
GGACAGCTCCATATCGCTGGACGCTCTCGATGCTTTGAGC
GACACACTGGGGGCTTCTAAACCACCCCAAAAATTACCAG
AACTCAAACCTGGACAGATAGTTGATGAGAAGAAACAGAC
CTCAGAGAAAGGTGTTCGTGTTGGAGAAAGAGACGACACA
CTTCCACCACAATACAGATTCAAAGAGGAAGATCTCAAGA
AATATCCTCCACCTGCGAAAGAGCCTTCACTGAACACAGA
TGATGCGATGGACATACTTTCAGGAGATTTCACGACCCCT
GCATCGGCACCTGTTGTCAAAGCTCCTGTTCCTCCTGCAC
AGGACACAAAGAAGCATGCTGCAGTGCCTGAGAAGACCAA
AGATATTCCCAAGACTAAAGCTGATGCTCTGTCAAGTGAT
TTCGTGGCTCCGGCACATTCTGCTCCTAAGGTTTCTTCAG
CTGCTCCTAAAACCATCCCTCCAGGCCCACCACAAACCCC
AGATGAGGATCCTTTCAGTGCTTTGGGCGACACTCTTTCT
GCCCCAGAACCACCAAAAAAACAACCTGACCTGAAACCTA
AGGACATCGTACATGAGAAGGATGTGACGTCAAAGAAAGG
AGTTCGTGTTGGAGAAAGAGACGACACACTCCCACCAGAA
TACAGATTCAAAGAGGAAGATCTCAAGAAATATCCTCCTC
CTCAGAAAGATCCTTCCTTAGATGCTAATGAAGCTCTGGA
TATTCTGTCTGGGGATTTTACAACTCCTTCCGCACCATCG
GCTGTTTCCCCTGCCTCTAAATCCTCTGCCAAGTCTTCAG
ATTCAGCTTTAGATGCTCTTGCTGGTGATTTCGTCGCTTC
TTCTTCTGCGTCTTCAGTTCATTCTGCCGTCTCTGGCCCC
CCACGCTCCGACAGACTGTTGTCAGACGGAACCTCATCAG
CTCTAGATGCCCTGTCAGAAACTCTGGGAGACATTAAAGC
AGCCCCTGAACCCGCCCCTGTCCTACCTAAAACTGTCGTT
AAGGAGAAGACGGTCATAGAAGAGAGAGTGAGTAAACCGG
GTGAGAGAGACGACTCCCTTCCACCAGATCAGCGGTTCAC
TGCGGAGGATCGCAAGGCATTTGAAGAAGCAAAGAAGAAA
GACGCCAAACCAAAACAGCCATCAATGGACGATTCAGCGG
CTCTGGACATGTTGTCTAGTGATTTTTCAGATGTACCGAC
TGTAAAGCCCACTGTATCTGATGGCAAAAGCTTCACCCCT
GAACCAACACCACCAACCTTTAAGGCAACCGGTCCGGTTT
TAGACAAACTGGCAGACAACGTGCTTTCCAACCTGACTGA
CCCCAAAGCCAAAGACAGCAAAGCAAAGGGAAAGGGGGCG
AAACCAAAGTCTAAACCAAAGAAACAGGCAGTGGAAGACT
CTTCAGCCACAGATCTGCTGTCCAGTAAACCGAGCTCAGA
TGTGGTGCCTTCAGCTTCCACAAAGGCTGGAAAAAGATAA
ATTACAA

Related Transcripts

Transcripts related to cast

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	cast-201	Ensembl	2527 nt
mRNA	cast-202 (1) Ensembl	Havana	710 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-203 (1) Ensembl	Havana	3766 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-204 (1) Ensembl	Havana	1062 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-205 (1) Ensembl	Havana	895 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-207 (1) Ensembl	Havana	729 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-208 (1) Ensembl	Havana	645 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-209 (1) Ensembl	Havana	977 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-211 (1) Ensembl	Havana	462 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-212 (1) Ensembl	Havana	762 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-213 (1) Ensembl	Havana	843 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-214 (1) Ensembl	Havana	398 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-215 (1) Ensembl	Havana	576 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-216 (1) Ensembl	Havana	747 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-217 (1) Ensembl	Ensembl	2515 nt	Select Tool ZFIN BLAST
mRNA	cast-218 (1) Ensembl	Ensembl	2443 nt	Select Tool ZFIN BLAST
mRNA	cast-219 (1) Ensembl	Ensembl	2734 nt	Select Tool ZFIN BLAST
ncRNA	cast-014 (1) Ensembl	Havana	328 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	cast-015 (1) Ensembl	Havana	467 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations