Transcript

cast-214

ID

ZDB-TSCRIPT-091110-1012

Name

cast-214 Nomenclature History

Previous Names

cast-005
dkey-184p9.11-005
dkey-238f9.1-001
ottdart00000043572

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

cast (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000144370 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000144370.3|gene_biotype:protein_coding|ENSDARG00000058693.6 transcript_biotype:protein_coding gene_symbol:cast cdna chromosome:GRCz11:21:11609249:11655010:-1
GCGTCACGTGCAGATAGTTATCAAAAGAATGGAGACACTT
CATTTCAAAAACAAGAATACGCTCCACAGACATCAAGGTT
CATGTCTCAGCAGGTCACACCCACCACAACATCTCAGGTC
TCCACAGTGAAACCTGCACAATATGAGGTGCAGGTTGAAG
TGGGTCCTTCAGCAGCAAAAGTCAGTGCAGATGCTGACGA
TCCGTTTGATGCCCTGTCTGGCACATTACCATCATCACAA
CCTTTGGCTCCTAAAGTCCACTACACTGGACCTGAGATCA
AAGAGCCCAAACTGAAATCAGAGAAAGGTGTTTTGTGTGG
TGAGCGAGATGACACGCTGCCGCCCGGATACAGAAAGGAA
GACCTGGAAAAGAAGCATGGAGCTGGAGTTCCAGCTGG

OTTDART00000043572 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043572|OTTDARG00000031291|ZDB-GENE-050810-2 cast|OTTDARP00000034544 DKEY-184P9.11-005 LG_none BX005379.9,BX927307.12,BX511081.8 Danio rerio protein_coding KNOWN, 398 bp
GCGTCACGTGCAGATAGTTATCAAAAGAATGGAGACACTT
CATTTCAAAAACAAGAATACGCTCCACAGACATCAAGGTT
CATGTCTCAGCAGGTCACACCCACCACAACATCTCAGGTC
TCCACAGTGAAACCTGCACAATATGAGGTGCAGGTTGAAG
TGGGTCCTTCAGCAGCAAAAGTCAGTGCAGATGCTGACGA
TCCGTTTGATGCCCTGTCTGGCACATTACCATCATCACAA
CCTTTGGCTCCTAAAGTCCACTACACTGGACCTGAGATCA
AAGAGCCCAAACTGAAATCAGAGAAAGGTGTTTTGTGTGG
TGAGCGAGATGACACGCTGCCGCCCGGATACAGAAAGGAA
GACCTGGAAAAGAAGCATGGAGCTGGAGTTCCAGCTGG

Related Transcripts

Transcripts related to cast

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	cast-201 (1) Ensembl	Ensembl	2,527 nt	Select Tool ZFIN BLAST
mRNA	cast-202 (1) Ensembl	Ensembl	710 nt	Select Tool
mRNA	cast-203 (1) Ensembl	Ensembl	3,766 nt	Select Tool
mRNA	cast-204 (1) Ensembl	Ensembl	1,062 nt	Select Tool
mRNA	cast-205 (1) Ensembl	Ensembl	895 nt	Select Tool
mRNA	cast-207 (1) Ensembl	Ensembl	729 nt	Select Tool
mRNA	cast-208 (1) Ensembl	Ensembl	645 nt	Select Tool
mRNA	cast-209 (1) Ensembl	Ensembl	977 nt	Select Tool
mRNA	cast-211 (1) Ensembl	Ensembl	462 nt	Select Tool
mRNA	cast-212 (1) Ensembl	Ensembl	762 nt	Select Tool
mRNA	cast-213 (1) Ensembl	Ensembl	843 nt	Select Tool
mRNA	cast-214	Ensembl	398 nt
mRNA	cast-215 (1) Ensembl	Ensembl	576 nt	Select Tool
mRNA	cast-216 (1) Ensembl	Ensembl	747 nt	Select Tool
mRNA	cast-217 (1) Ensembl	Ensembl	2,515 nt	Select Tool ZFIN BLAST
mRNA	cast-218 (1) Ensembl	Ensembl	2,443 nt	Select Tool ZFIN BLAST
mRNA	cast-219 (1) Ensembl	Ensembl	2,734 nt	Select Tool ZFIN BLAST
ncRNA	cast-014 (1) Ensembl	Ensembl	328 nt	Select Tool
ncRNA	cast-015 (1) Ensembl	Ensembl	467 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations