Transcript

cast-218

ID

ZDB-TSCRIPT-240508-3412

Name

cast-218 Nomenclature History

Previous Names

None

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

cast (1)

Strain

Non Reference Strain

Genome Resources

Ensembl_Trans:ENSDART00000171708

RNA Central

None

Note

None

Sequence

ENSDART00000171708 [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000171708.2|gene_biotype:protein_coding|ENSDARG00000058693.6 transcript_biotype:protein_coding gene_symbol:cast cdna chromosome:GRCz11:21:11568462:11632403:-1
ATGTCTCAGCAGGTCACACCCACCACAACATCTCAGGTCT
CCACAGTGAAACCTGCACAATATGAGAAAGGAGCTACACA
ATCGTCTACAGCAGCTGCGACTGTCAAATCCGGCGCTGGA
GATCCTGCAACCACCCAGAAAGGATCTTCTCAAGTCAAAC
CTCAGGTCACAGATTCTAAATCAACACCTGCATCTTCTGC
TAAAGTCTCAGCTGTGAGCTCTGGGACTGGAGTTGCTGGT
ACAACCGGTGGAGCAGGAGTGAAACCAGCAGATCCTGCAA
AAGATACGCCTCAGAGCACCACCATTCCTTCAACCAAACT
GGGACCTGCTAAGGTGGATCCGGCTGCTGGGAAGCCCTCT
GGCTCAGCTGGTGCCCAAAAACAGACAAGTGCTCAAAAGG
TGCAGGTTGAAGTGGGTCCTTCAGCAGCAAAAGTCAGTGC
AGATGCTGACGATCCGTTTGATGCCCTGTCTGGCACATTA
CCATCATCACAACCTTTGGCTCCTAAAGTCCACTACACTG
GACCTGAGATCAAAGAGCCCAAACTGAAATCAGAGAAAGG
TGTTTTGTGTGGTGAGCGAGATGACACGCTGCCGCCCGGA
TACAGAAAGGAAGACCTGGAAAAGAAGCATGGAGCTGGAG
TTCCAGCTGGAGTTCCGGAGAAGCCTAAAGAAGTTCCCAA
GCCCATAAGCACAGATGATGCACTGGAATCTCTCTCCTCT
ACGTTTGTGTCTCCAGCTCAAGCTGCTCCAAAGAAGACAG
ACGTGAAAACTGAAACAATAGGAGCAGTGGATGTTAAATC
GGCAGGCACCACTAACTTTGCTCCCCCTCCACCATCTCAG
CAGAAACAACCGGCGTCGTCTCAAGCTGCTGCTGTAACCA
AATCACCTGCTCCACCGGCAGACAAGAAAGCTAAAATGGA
GACTCATGCACAACCAGCCAAAGCAAAGACAGAGTCGGAC
AGCTCCATATCGCTGGACGCTCTCGATGCTTTGAGCGACA
CACTGGGGGCTTCTAAACCACCCCAAAAATTACCAGAACT
CAAACCTGGACAGATAGTTGATGAGAAGAAACAGACCTCA
GAGAAAGGTGTTCGTGTTGGAGAAAGAGACGACACACTTC
CACCACAATACAGATTCAAAGAGGAAGATCTCAAGAAATA
TCCTCCACCTGCGAAAGAGCCTTCACTGAACACAGATGAT
GCGATGGACATACTTTCAGGAGATTTCACGACCCCTGCAT
CGGCACCTGTTGTCAAAGCTCCTGTTCCTCCTGCACAGGA
CACAAAGAAGCATGCTGCAGTGCCTGAGAAGACCAAAGAT
ATTCCCAAGACTAAAGCTGATGCTCTGTCAAGTGATTTCG
TGGCTCCGGCACATTCTGCTCCTAAGGTTTCTTCAGCTGC
TCCTAAAACCATCCCTCCAGGCCCACCACAAACCCCAGAT
GAGGATCCTTTCAGTGCTTTGGGCGACACTCTTTCTGCCC
CAGAACCACCAAAAAAACAACCTGACCTGAAACCTAAGGA
CATCGTACATGAGAAGGATGTGACGTCAAAGAAAGGAGTT
CGTGTTGGAGAAAGAGACGACACACTCCCACCAGAATACA
GATTCAAAGAGGAAGATCTCAAGAAATATCCTCCTCCTCA
GAAAGATCCTTCCTTAGATGCTAATGAAGCTCTGGATATT
CTGTCTGGGGATTTTACAACTCCTTCCGCACCATCGGCTG
TTTCCCCTGCCTCTAAATCCTCTGCCAAGTCTTCAGATTC
AGCTTTAGATGCTCTTGCTGGTGATTTCGTCGCTTCTTCT
TCTGCGTCTTCAGTTCATTCTGCCGTCTCTGGCCCCCCAC
GCTCCGACAGACTGTTGTCAGACGGAACCTCATCAGCTCT
AGATGCCCTGTCAGAAACTCTGGGAGACATTAAAGCAGCC
CCTGAACCCGCCCCTGTCCTACCTAAAACTGTCGTTAAGG
AGAAGACGGTCATAGAAGAGAGAGTGAGTAAACCGGGTGA
GAGAGACGACTCCCTTCCACCAGATCAGCGGTTCACTGCG
GAGGATCGCAAGGCATTTGAAGAAGCAAAGAAGAAAGACG
CCAAACCAAAACAGCCATCAATGGACGATTCAGCGGCTCT
GGACATGTTGTCTAGTGATTTTTCAGATGTACCGACTGTA
AAGCCCACTGTATCTGATGGCAAAAGCTTCACCCCTGAAC
CAACACCACCAACCTTTAAGGCAACCGGTCCGGTTTTAGA
CAAACTGGCAGACAACGTGCTTTCCAACCTGACTGACCCC
AAAGCCAAAGACAGCAAAGCAAAGGGAAAGGGGGCGAAAC
CAAAGTCTAAACCAAAGAAACAGGCAGTGGAAGACTCTTC
AGCCACAGATCTGCTGTCCAGTAAACCGAGCTCAGATGTG
GTGCCTTCAGCTTCCACAAAGGCTGGAAAAAGATAAATTA
CAA

Related Transcripts

Transcripts related to cast

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	cast-201 (1) Ensembl	Ensembl	2527 nt	Select Tool ZFIN BLAST
mRNA	cast-202 (1) Ensembl	Havana	710 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-203 (1) Ensembl	Havana	3766 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-204 (1) Ensembl	Havana	1062 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-205 (1) Ensembl	Havana	895 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-207 (1) Ensembl	Havana	729 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-208 (1) Ensembl	Havana	645 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-209 (1) Ensembl	Havana	977 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-211 (1) Ensembl	Havana	462 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-212 (1) Ensembl	Havana	762 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-213 (1) Ensembl	Havana	843 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-214 (1) Ensembl	Havana	398 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-215 (1) Ensembl	Havana	576 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-216 (1) Ensembl	Havana	747 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-217 (1) Ensembl	Ensembl	2515 nt	Select Tool ZFIN BLAST
mRNA	cast-218	Ensembl	2443 nt
mRNA	cast-219 (1) Ensembl	Ensembl	2734 nt	Select Tool ZFIN BLAST
ncRNA	cast-014 (1) Ensembl	Havana	328 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	cast-015 (1) Ensembl	Havana	467 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations