Transcript

cast-216

ID

ZDB-TSCRIPT-091110-1737

Name

cast-216 Nomenclature History

Previous Names

cast-008
ch211-260m19.7-001
dkey-184p9.11-008
ottdart00000043576

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

cast (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000148097 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000148097.3|gene_biotype:protein_coding|ENSDARG00000058693.6 transcript_biotype:protein_coding gene_symbol:cast cdna chromosome:GRCz11:21:11605611:11646935:-1
AGGCAGCAGAAGGAGCAGAGCCACAGAGACGGCGTCACAC
ACTCAGCAGAAGTAAACATGGGCCAGATCTTCAGCTGGAT
CCGCGGCACACGCGACCAACCGGCCCTGCAGGACATCGCA
GTAGAGCAACAGTCTCAGCAGGTCACACCCACCACAACAT
CTCAGGTCTCCACAGTGAAACCTGCACAATATGAGGTGCA
GGTTGAAGTGGGTCCTTCAGCAGCAAAAGTCAGTGCAGAT
GCTGACGATCCGTTTGATGCCCTGTCTGGCACATTACCAT
CATCACAACCTTTGGCTCCTAAAGTCCACTACACTGGACC
TGAGATCAAAGAGCCCAAACTGAAATCAGAGAAAGGTGTT
TTGTGTGGTGAGCGAGATGACACGCTGCCGCCCGGATACA
GAAAGGAAGACCTGGAAAAGAAGCATGGAGCTGGAGTTCC
AGCTGGAGTTCCGGAGAAGCCTAAAGAAGTTCCCAAGCCC
ATAAGCACAGATGATGCACTGGAATCTCTCTCCTCTACGT
TTGTGTCTCCAGCTCAAGCTGCTCCAAAGAAGACAGACGT
GAAAACTGAAACAATAGGAGCAGTGGATGTTAAATCGGCA
GGCACCACTAACTTTGCTCCCCCTCCACCATCTCAGCAGA
AACAACCGGCGTCGTCTCAAGCTGCTGCTGTAACCAAATC
ACCTGCTCCACCGGCAGACAAGAAAGCTAAAATGGAGACT
CATGCACAACCAGCCAAAGCAAAGACA

OTTDART00000043576 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043576|OTTDARG00000031291|ZDB-GENE-050810-2 cast|OTTDARP00000034548 DKEY-184P9.11-008 LG_none BX005379.9,BX927307.12,BX511081.8 Danio rerio protein_coding KNOWN, 747 bp
AGGCAGCAGAAGGAGCAGAGCCACAGAGACGGCGTCACAC
ACTCAGCAGAAGTAAACATGGGCCAGATCTTCAGCTGGAT
CCGCGGCACACGCGACCAACCGGCCCTGCAGGACATCGCA
GTAGAGCAACAGTCTCAGCAGGTCACACCCACCACAACAT
CTCAGGTCTCCACAGTGAAACCTGCACAATATGAGGTGCA
GGTTGAAGTGGGTCCTTCAGCAGCAAAAGTCAGTGCAGAT
GCTGACGATCCGTTTGATGCCCTGTCTGGCACATTACCAT
CATCACAACCTTTGGCTCCTAAAGTCCACTACACTGGACC
TGAGATCAAAGAGCCCAAACTGAAATCAGAGAAAGGTGTT
TTGTGTGGTGAGCGAGATGACACGCTGCCGCCCGGATACA
GAAAGGAAGACCTGGAAAAGAAGCATGGAGCTGGAGTTCC
AGCTGGAGTTCCGGAGAAGCCTAAAGAAGTTCCCAAGCCC
ATAAGCACAGATGATGCACTGGAATCTCTCTCCTCTACGT
TTGTGTCTCCAGCTCAAGCTGCTCCAAAGAAGACAGACGT
GAAAACTGAAACAATAGGAGCAGTGGATGTTAAATCGGCA
GGCACCACTAACTTTGCTCCCCCTCCACCATCTCAGCAGA
AACAACCGGCGTCGTCTCAAGCTGCTGCTGTAACCAAATC
ACCTGCTCCACCGGCAGACAAGAAAGCTAAAATGGAGACT
CATGCACAACCAGCCAAAGCAAAGACA

Related Transcripts

Transcripts related to cast

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	cast-201 (1) Ensembl	Ensembl	2,527 nt	Select Tool ZFIN BLAST
mRNA	cast-202 (1) Ensembl	Ensembl	710 nt	Select Tool
mRNA	cast-203 (1) Ensembl	Ensembl	3,766 nt	Select Tool
mRNA	cast-204 (1) Ensembl	Ensembl	1,062 nt	Select Tool
mRNA	cast-205 (1) Ensembl	Ensembl	895 nt	Select Tool
mRNA	cast-207 (1) Ensembl	Ensembl	729 nt	Select Tool
mRNA	cast-208 (1) Ensembl	Ensembl	645 nt	Select Tool
mRNA	cast-209 (1) Ensembl	Ensembl	977 nt	Select Tool
mRNA	cast-211 (1) Ensembl	Ensembl	462 nt	Select Tool
mRNA	cast-212 (1) Ensembl	Ensembl	762 nt	Select Tool
mRNA	cast-213 (1) Ensembl	Ensembl	843 nt	Select Tool
mRNA	cast-214 (1) Ensembl	Ensembl	398 nt	Select Tool
mRNA	cast-215 (1) Ensembl	Ensembl	576 nt	Select Tool
mRNA	cast-216	Ensembl	747 nt
mRNA	cast-217 (1) Ensembl	Ensembl	2,515 nt	Select Tool ZFIN BLAST
mRNA	cast-218 (1) Ensembl	Ensembl	2,443 nt	Select Tool ZFIN BLAST
mRNA	cast-219 (1) Ensembl	Ensembl	2,734 nt	Select Tool ZFIN BLAST
ncRNA	cast-014 (1) Ensembl	Ensembl	328 nt	Select Tool
ncRNA	cast-015 (1) Ensembl	Ensembl	467 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations