Transcript

cast-205

ID

ZDB-TSCRIPT-091110-281

Name

cast-205 Nomenclature History

Previous Names

cast-007
dkey-184p9.11-003
dkey-184p9.11-007
ottdart00000043574

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

cast (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000133443 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000133443.3|gene_biotype:protein_coding|ENSDARG00000058693.6 transcript_biotype:protein_coding gene_symbol:cast cdna chromosome:GRCz11:21:11607767:11646951:-1
GAACATGCTGTAACTCAGGCAGCAGAAGGAGCAGAGCCAC
AGAGACGGCGTCACACACTCAGCAGAAGTAAACATGGGCC
AGATCTTCAGCTGGATCCGCGGCACACGCGACCAACCGGC
CCTGCAGGACATCGCAGTAGAGCAACAGTCTCAGCAGGTC
ACACCCACCACAACATCTCAGGTCTCCACAGTGAAACCTG
CACAATATGAGAAAGGAGCTACACAATCGTCTACAGCAGC
TGCGACTGTCAAATCCGGCGCTGGAGATCCTGCAACCACC
CAGAAAGGATCTTCTCAAGTCAAACCTCAGGTCACAGATT
CTAAATCAACACCTGCATCTTCTGCTAAAGTCTCAGCTGT
GAGCTCTGGGACTGGAGTTGCTGGTACAACCGGTGGAGCA
GGAGTGAAACCAGCAGATCCTGCAAAAGATACGCCTCAGA
GCACCACCATTCCTTCAACCAAACTGGGACCTGCTAAGGT
GGATCCGGCTGCTGGGAAGCCCTCTGGCTCAGCTGGTGCC
CAAAAACAGACAAGTGCTCAAAAGGTGCAGGTTGAAGTGG
GTCCTTCAGCAGCAAAAGTCAGTGCAGATGCTGACGATCC
GTTTGATGCCCTGTCTGGCACATTACCATCATCACAACCT
TTGGCTCCTAAAGTCCACTACACTGGACCTGAGATCAAAG
AGCCCAAACTGAAATCAGAGAAAGGTGTTTTGTGTGGTGA
GCGAGATGACACGCTGCCGCCCGGATACAGAAAGGAAGAC
CTGGAAAAGAAGCATGGAGCTGGAGTTCCAGCTGGAGTTC
CGGAGAAGCCTAAAGAAGTTCCCAAGCCCATAAGCACAGA
TGATGCACTGGAATCTCTCTCCTCTACGTTTGTGTCTCCA
GCTCAAGCTGCTCCA

OTTDART00000043574 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043574|OTTDARG00000031291|ZDB-GENE-050810-2 cast|OTTDARP00000034546 DKEY-184P9.11-007 LG_none BX005379.9,BX927307.12,BX511081.8 Danio rerio protein_coding KNOWN, 895 bp
GAACATGCTGTAACTCAGGCAGCAGAAGGAGCAGAGCCAC
AGAGACGGCGTCACACACTCAGCAGAAGTAAACATGGGCC
AGATCTTCAGCTGGATCCGCGGCACACGCGACCAACCGGC
CCTGCAGGACATCGCAGTAGAGCAACAGTCTCAGCAGGTC
ACACCCACCACAACATCTCAGGTCTCCACAGTGAAACCTG
CACAATATGAGAAAGGAGCTACACAATCGTCTACAGCAGC
TGCGACTGTCAAATCCGGCGCTGGAGATCCTGCAACCACC
CAGAAAGGATCTTCTCAAGTCAAACCTCAGGTCACAGATT
CTAAATCAACACCTGCATCTTCTGCTAAAGTCTCAGCTGT
GAGCTCTGGGACTGGAGTTGCTGGTACAACCGGTGGAGCA
GGAGTGAAACCAGCAGATCCTGCAAAAGATACGCCTCAGA
GCACCACCATTCCTTCAACCAAACTGGGACCTGCTAAGGT
GGATCCGGCTGCTGGGAAGCCCTCTGGCTCAGCTGGTGCC
CAAAAACAGACAAGTGCTCAAAAGGTGCAGGTTGAAGTGG
GTCCTTCAGCAGCAAAAGTCAGTGCAGATGCTGACGATCC
GTTTGATGCCCTGTCTGGCACATTACCATCATCACAACCT
TTGGCTCCTAAAGTCCACTACACTGGACCTGAGATCAAAG
AGCCCAAACTGAAATCAGAGAAAGGTGTTTTGTGTGGTGA
GCGAGATGACACGCTGCCGCCCGGATACAGAAAGGAAGAC
CTGGAAAAGAAGCATGGAGCTGGAGTTCCAGCTGGAGTTC
CGGAGAAGCCTAAAGAAGTTCCCAAGCCCATAAGCACAGA
TGATGCACTGGAATCTCTCTCCTCTACGTTTGTGTCTCCA
GCTCAAGCTGCTCCA

Related Transcripts

Transcripts related to cast

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	cast-201 (1) Ensembl	Ensembl	2,527 nt	Select Tool ZFIN BLAST
mRNA	cast-202 (1) Ensembl	Ensembl	710 nt	Select Tool
mRNA	cast-203 (1) Ensembl	Ensembl	3,766 nt	Select Tool
mRNA	cast-204 (1) Ensembl	Ensembl	1,062 nt	Select Tool
mRNA	cast-205	Ensembl	895 nt
mRNA	cast-207 (1) Ensembl	Ensembl	729 nt	Select Tool
mRNA	cast-208 (1) Ensembl	Ensembl	645 nt	Select Tool
mRNA	cast-209 (1) Ensembl	Ensembl	977 nt	Select Tool
mRNA	cast-211 (1) Ensembl	Ensembl	462 nt	Select Tool
mRNA	cast-212 (1) Ensembl	Ensembl	762 nt	Select Tool
mRNA	cast-213 (1) Ensembl	Ensembl	843 nt	Select Tool
mRNA	cast-214 (1) Ensembl	Ensembl	398 nt	Select Tool
mRNA	cast-215 (1) Ensembl	Ensembl	576 nt	Select Tool
mRNA	cast-216 (1) Ensembl	Ensembl	747 nt	Select Tool
mRNA	cast-217 (1) Ensembl	Ensembl	2,515 nt	Select Tool ZFIN BLAST
mRNA	cast-218 (1) Ensembl	Ensembl	2,443 nt	Select Tool ZFIN BLAST
mRNA	cast-219 (1) Ensembl	Ensembl	2,734 nt	Select Tool ZFIN BLAST
ncRNA	cast-014 (1) Ensembl	Ensembl	328 nt	Select Tool
ncRNA	cast-015 (1) Ensembl	Ensembl	467 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations