Transcript

cast-211

ID

ZDB-TSCRIPT-091110-280

Name

cast-211 Nomenclature History

Previous Names

cast-004
oat-002
dkey-184p9.11-004
ottdart00000043571

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

cast (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000139289 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000139289.3|gene_biotype:protein_coding|ENSDARG00000058693.6 transcript_biotype:protein_coding gene_symbol:cast cdna chromosome:GRCz11:21:11612129:11655019:-1
CCAGGATGAGCGTCACGTGCAGATAGTTATCAAAAGAATG
GAGACACTTCATTTCAAAAACAAGAATACGCTCCACAGAC
ATCAAGGTTCATGTCTCAGCAGGTCACACCCACCACAACA
TCTCAGGTCTCCACAGTGAAACCTGCACAATATGAGAAAG
GAGCTACACAATCGTCTACAGCAGCTGCGACTGTCAAATC
CGGCGCTGGAGATCCTGCAACCACCCAGAAAGGATCTTCT
CAAGTCAAACCTCAGGTGCAGGTTGAAGTGGGTCCTTCAG
CAGCAAAAGCTGACGATCCGTTTGATGCCCTGTCTGGCAC
ATTACCATCATCACAACCTTTGGCTCCTAAAGTCCACTAC
ACTGGACCTGAGATCAAAGAGCCCAAACTGAAATCAGAGA
AAGGTGTTTTGTGTGGTGAGCGAGATGACACGCTGCCGCC
CGGATACAGAAAGGAAGACCTG

OTTDART00000043571 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043571|OTTDARG00000031291|ZDB-GENE-050810-2 cast|OTTDARP00000034543 DKEY-184P9.11-004 LG_none BX005379.9,BX927307.12,BX511081.8 Danio rerio protein_coding KNOWN, 462 bp
CCAGGATGAGCGTCACGTGCAGATAGTTATCAAAAGAATG
GAGACACTTCATTTCAAAAACAAGAATACGCTCCACAGAC
ATCAAGGTTCATGTCTCAGCAGGTCACACCCACCACAACA
TCTCAGGTCTCCACAGTGAAACCTGCACAATATGAGAAAG
GAGCTACACAATCGTCTACAGCAGCTGCGACTGTCAAATC
CGGCGCTGGAGATCCTGCAACCACCCAGAAAGGATCTTCT
CAAGTCAAACCTCAGGTGCAGGTTGAAGTGGGTCCTTCAG
CAGCAAAAGCTGACGATCCGTTTGATGCCCTGTCTGGCAC
ATTACCATCATCACAACCTTTGGCTCCTAAAGTCCACTAC
ACTGGACCTGAGATCAAAGAGCCCAAACTGAAATCAGAGA
AAGGTGTTTTGTGTGGTGAGCGAGATGACACGCTGCCGCC
CGGATACAGAAAGGAAGACCTG

Related Transcripts

Transcripts related to cast

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	cast-201 (1) Ensembl	Ensembl	2,527 nt	Select Tool ZFIN BLAST
mRNA	cast-202 (1) Ensembl	Ensembl	710 nt	Select Tool
mRNA	cast-203 (1) Ensembl	Ensembl	3,766 nt	Select Tool
mRNA	cast-204 (1) Ensembl	Ensembl	1,062 nt	Select Tool
mRNA	cast-205 (1) Ensembl	Ensembl	895 nt	Select Tool
mRNA	cast-207 (1) Ensembl	Ensembl	729 nt	Select Tool
mRNA	cast-208 (1) Ensembl	Ensembl	645 nt	Select Tool
mRNA	cast-209 (1) Ensembl	Ensembl	977 nt	Select Tool
mRNA	cast-211	Ensembl	462 nt
mRNA	cast-212 (1) Ensembl	Ensembl	762 nt	Select Tool
mRNA	cast-213 (1) Ensembl	Ensembl	843 nt	Select Tool
mRNA	cast-214 (1) Ensembl	Ensembl	398 nt	Select Tool
mRNA	cast-215 (1) Ensembl	Ensembl	576 nt	Select Tool
mRNA	cast-216 (1) Ensembl	Ensembl	747 nt	Select Tool
mRNA	cast-217 (1) Ensembl	Ensembl	2,515 nt	Select Tool ZFIN BLAST
mRNA	cast-218 (1) Ensembl	Ensembl	2,443 nt	Select Tool ZFIN BLAST
mRNA	cast-219 (1) Ensembl	Ensembl	2,734 nt	Select Tool ZFIN BLAST
ncRNA	cast-014 (1) Ensembl	Ensembl	328 nt	Select Tool
ncRNA	cast-015 (1) Ensembl	Ensembl	467 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations