Transcript

nop56-007

ID

ZDB-TSCRIPT-090929-18669

Name

nop56-007 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

nop56 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000123335 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000123335.4|gene_biotype:protein_coding|ENSDARG00000012820.12 transcript_biotype:retained_intron gene_symbol:nop56 cdna chromosome:GRCz11:21:11959105:11963446:-1
GCATGTGTATTGGTTTTAATATGTTGTCTTGATTGACCAG
TTATCAGAAATTTAAAAATGTTTCAAATTGTAAAAAAATC
TGCTAGTTATTATATTGAACTAAACTACTTTTGTAATTGT
TATTACTCTTGCCTTAAAATAGCCATAAGTTGCTGATGTG
GCAAATAAGTAACCTTAACAATGAACAGCAATGATAGTGT
TTTTGTCTATATCTAGAAGTTGTCAGTCGCATAGAAGCTC
AATTCAGTTACCTTAAGCCAAATAGAATTTCTGAAACATT
AGTTTTTGGGTAATTGCAGTTTTTGATTTTTTTTATGGGA
AGCAGTTTTGGTGCATCACACAATTGTCAATGCCAAAATT
GTGGTGTAGATGGACTTTCTTTTGCTCTTTCCCCTAATTC
AGAGCATTGAAGACCAGAGGAAACACGCCTAAGTACGGTC
TCATTTTCCACTCGACATTCATCGGGCGCGCAGCTGCCAA
AAATAAGGGTCGTATCTCGCGTTACTTGGCCAACAAGTGT
ACCATCGCATCCCGCATTGACTGCTTTTCTGAGGTTCCCA
CAAGTGTGTTTGGTGATAAGCTTCGTGACCAGGTAGAAGA
ACGTCTGGCCTTCTATGAGACAGGGGAGGCTCCACGAAAG
AATCTGGATGTCATGAAAGAAGCTGTTGCACAGGCTTCTG
AGGTGGCTGCTGAAATAAAGCGGAAGCTTGAGAAAAAGGA
AAAGAAGAAAAAGAAGCGGCAGAAGAAGCTAGAAGCTCTT
TCCACTGCAGAAGGAGATGAGGAAACCAATGGTGATGTTG
AGGAAAATGAAGTCGCCACAAAGAAGAAAAAGAAAAAGCA
GGCCGCAGAGGAGATGGAGGTAAAAGAGGATGAGGAGGTC
ACAACAAACGGTGTTGAAGAAACGCCTGGTAAGAAGAAAA
AGAAGAGGAAGATTGAGGCTGTGGAGGCCGAGCCTGAAGT
CCAGGAGGAAGCAGATGAGACTCAGGTGGAGAAGAAAAAG
AAAAAAAAGAAAAA

OTTDART00000038279 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000038279|OTTDARG00000028183|ZDB-GENE-040109-1 nop56|no_translation nol5a-007 LG_ CT027620.13 Danio rerio protein_coding KNOWN, 1014 bp
GCATGTGTATTGGTTTTAATATGTTGTCTTGATTGACCAG
TTATCAGAAATTTAAAAATGTTTCAAATTGTAAAAAAATC
TGCTAGTTATTATATTGAACTAAACTACTTTTGTAATTGT
TATTACTCTTGCCTTAAAATAGCCATAAGTTGCTGATGTG
GCAAATAAGTAACCTTAACAATGAACAGCAATGATAGTGT
TTTTGTCTATATCTAGAAGTTGTCAGTCGCATAGAAGCTC
AATTCAGTTACCTTAAGCCAAATAGAATTTCTGAAACATT
AGTTTTTGGGTAATTGCAGTTTTTGATTTTTTTTATGGGA
AGCAGTTTTGGTGCATCACACAATTGTCAATGCCAAAATT
GTGGTGTAGATGGACTTTCTTTTGCTCTTTCCCCTAATTC
AGAGCATTGAAGACCAGAGGAAACACGCCTAAGTACGGTC
TCATTTTCCACTCGACATTCATCGGGCGCGCAGCTGCCAA
AAATAAGGGTCGTATCTCGCGTTACTTGGCCAACAAGTGT
ACCATCGCATCCCGCATTGACTGCTTTTCTGAGGTTCCCA
CAAGTGTGTTTGGTGATAAGCTTCGTGACCAGGTAGAAGA
ACGTCTGGCCTTCTATGAGACAGGGGAGGCTCCACGAAAG
AATCTGGATGTCATGAAAGAAGCTGTTGCACAGGCTTCTG
AGGTGGCTGCTGAAATAAAGCGGAAGCTTGAGAAAAAGGA
AAAGAAGAAAAAGAAGCGGCAGAAGAAGCTAGAAGCTCTT
TCCACTGCAGAAGGAGATGAGGAAACCAATGGTGATGTTG
AGGAAAATGAAGTCGCCACAAAGAAGAAAAAGAAAAAGCA
GGCCGCAGAGGAGATGGAGGTAAAAGAGGATGAGGAGGTC
ACAACAAACGGTGTTGAAGAAACGCCTGGTAAGAAGAAAA
AGAAGAGGAAGATTGAGGCTGTGGAGGCCGAGCCTGAAGT
CCAGGAGGAAGCAGATGAGACTCAGGTGGAGAAGAAAAAG
AAAAAAAAGAAAAA

Related Transcripts

Transcripts related to nop56

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	nop56-201 (1) Ensembl	Ensembl	836 nt	Select Tool ZFIN BLAST
aberrant processed transcript	nop56-202 (1) Ensembl	Ensembl	1,134 nt	Select Tool ZFIN BLAST
mRNA	nop56-203 (1) Ensembl	Ensembl	2,039 nt	Select Tool ZFIN BLAST
ncRNA	nop56-003 (1) Ensembl	Ensembl	826 nt	Select Tool ZFIN BLAST
ncRNA	nop56-004 (1) Ensembl	Ensembl	794 nt	Select Tool ZFIN BLAST
ncRNA	nop56-005 (1) Ensembl	Ensembl	799 nt	Select Tool ZFIN BLAST
ncRNA	nop56-007	Ensembl	1,014 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations