Transcript

nop56-005

ID

ZDB-TSCRIPT-090929-18667

Name

nop56-005 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

nop56 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000134902 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000134902.2|gene_biotype:protein_coding|ENSDARG00000012820.12 transcript_biotype:retained_intron gene_symbol:nop56 cdna chromosome:GRCz11:21:11963249:11964926:-1
AAAGCTCAGGCCATCCTCGATGCGTCCCGCAGCTCCATGG
GTATGGATATCTCTCCTATTGACCTGATCAATATTGAGTG
CTTCTCCAGTCGTGTGGTGTCCCTCACAGACTACAGACAG
GAACTGCAAGAGTACCTGAGGTCAAAAATGGGCCAGGTGG
CACCAAATCTCGCAGCTCTCATTGGTGAAGTGGTTGGTGC
TCGCCTGATCTCTCACGCTGGCAGTTTGACAAACCTGGCC
AAATATCCGGCGTCCACCGTGCAGATCCTGGGTGCAGAGA
AGGCCCTGTTCAGGTACTGGGGCTCCCCTTCCCTGCTGGG
GTTTTACACAGCTGCGGTGATGGCAGGGCCGGGGCGGATC
AGGAGCGGGTGATTTGGTGTGTCATTGAACACGCTTTAAG
GTGATCCCGCTCAATCTCCCGTACCCCCCAGTCTGAGCAG
CTGATGAGGGTTTTGAGAGGTAGATACATCTGAAGACGTT
CTGTTGAGAGAGCGCACATGTACAATTACTTCATAGAAAA
TTACATCTTCAGTTTCTAGTTTAGTAGAATATTTACAGAT
AATGTATGTCGTGTGATGCTCCAACATATCAGCAGCTGAA
AGCATGTGTATTGGTTTTAATATGTTGTCTTGATTGACCA
GTTATCAGAAATTTAAAAATGTTTCAAATTGTAAAAAAAT
CTGCTAGTTATTATATTGAACTAAACTACTTTTGTAATTG
TTATTACTCTTGCCTTAAAATAGCCATAAGTTGCTGATGT
GGCAAATAAGTAACCTTAACAATGAACAGCAATGATAGT

OTTDART00000038277 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000038277|OTTDARG00000028183|ZDB-GENE-040109-1 nop56|no_translation nol5a-005 LG_ CT027620.13 Danio rerio protein_coding KNOWN, 799 bp
AAAGCTCAGGCCATCCTCGATGCGTCCCGCAGCTCCATGG
GTATGGATATCTCTCCTATTGACCTGATCAATATTGAGTG
CTTCTCCAGTCGTGTGGTGTCCCTCACAGACTACAGACAG
GAACTGCAAGAGTACCTGAGGTCAAAAATGGGCCAGGTGG
CACCAAATCTCGCAGCTCTCATTGGTGAAGTGGTTGGTGC
TCGCCTGATCTCTCACGCTGGCAGTTTGACAAACCTGGCC
AAATATCCGGCGTCCACCGTGCAGATCCTGGGTGCAGAGA
AGGCCCTGTTCAGGTACTGGGGCTCCCCTTCCCTGCTGGG
GTTTTACACAGCTGCGGTGATGGCAGGGCCGGGGCGGATC
AGGAGCGGGTGATTTGGTGTGTCATTGAACACGCTTTAAG
GTGATCCCGCTCAATCTCCCGTACCCCCCAGTCTGAGCAG
CTGATGAGGGTTTTGAGAGGTAGATACATCTGAAGACGTT
CTGTTGAGAGAGCGCACATGTACAATTACTTCATAGAAAA
TTACATCTTCAGTTTCTAGTTTAGTAGAATATTTACAGAT
AATGTATGTCGTGTGATGCTCCAACATATCAGCAGCTGAA
AGCATGTGTATTGGTTTTAATATGTTGTCTTGATTGACCA
GTTATCAGAAATTTAAAAATGTTTCAAATTGTAAAAAAAT
CTGCTAGTTATTATATTGAACTAAACTACTTTTGTAATTG
TTATTACTCTTGCCTTAAAATAGCCATAAGTTGCTGATGT
GGCAAATAAGTAACCTTAACAATGAACAGCAATGATAGT

Related Transcripts

Transcripts related to nop56

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	nop56-201 (1) Ensembl	Ensembl	836 nt	Select Tool ZFIN BLAST
aberrant processed transcript	nop56-202 (1) Ensembl	Ensembl	1,134 nt	Select Tool ZFIN BLAST
mRNA	nop56-203 (1) Ensembl	Ensembl	2,039 nt	Select Tool ZFIN BLAST
ncRNA	nop56-003 (1) Ensembl	Ensembl	826 nt	Select Tool ZFIN BLAST
ncRNA	nop56-004 (1) Ensembl	Ensembl	794 nt	Select Tool ZFIN BLAST
ncRNA	nop56-005	Ensembl	799 nt
ncRNA	nop56-007 (1) Ensembl	Ensembl	1,014 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations