Transcript

nop56-201

ID

ZDB-TSCRIPT-090929-18668

Name

nop56-201 Nomenclature History

Previous Names

nop56-006

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

nop56 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000062681 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000062681.7|gene_biotype:protein_coding|ENSDARG00000012820.12 transcript_biotype:nonsense_mediated_decay gene_symbol:nop56 cdna chromosome:GRCz11:21:11959300:11964686:-1
GTATGGATATCTCTCCTATTGACCTGATCAATATTGAGTG
CTTCTCCAGTCGTGTGGTGTCCCTCACAGACTACAGACAG
GAACTGCAAGAGTACCTGAGGTCAAAAATGGGCCAGGTGG
CACCAAATCTCGCAGCTCTCATTGGTGAAGTGGTTGGTGC
TCGCCTGATCTCTCACGCTGGCAGTTTGACAAACCTGGCC
AAATATCCGGCGTCCACCGTGCAGATCCTGGGTGCAGAGA
AGGCCCTGTTCAGGTACTGGGGCTCCCCTTCCCTGCTGGG
GTTTTACACAGCTGCGGTGATGGCAGGGCCGGGGCGGATC
AGGAGCGGGTGATTTGGTGTGTCATTGAACACGCTTTAAG
GTGATCCCGCTCAATCTCCCGTACCCCCCAGTCTGAGCAG
CTGATGAGGGTTTTGAGAGAGCATTGAAGACCAGAGGAAA
CACGCCTAAGTACGGTCTCATTTTCCACTCGACATTCATC
GGGCGCGCAGCTGCCAAAAATAAGGGTCGTATCTCGCGTT
ACTTGGCCAACAAGTGTACCATCGCATCCCGCATTGACTG
CTTTTCTGAGGTTCCCACAAGTGTGTTTGGTGATAAGCTT
CGTGACCAGGTAGAAGAACGTCTGGCCTTCTATGAGACAG
GGGAGGCTCCACGAAAGAATCTGGATGTCATGAAAGAAGC
TGTTGCACAGGCTTCTGAGGTGGCTGCTGAAATAAAGCGG
AAGCTTGAGAAAAAGGAAAAGAAGAAAAAGAAGCGGCAGA
AGAAGCTAGAAGCTCTTTCCACTGCAGAAGGAGATGAGGA
AACCAATGGTGATGTTGAGGAAAATGAAGTCGCCAC

OTTDART00000038278 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000038278|OTTDARG00000028183|ZDB-GENE-040109-1 nop56|OTTDARP00000030673 nol5a-006 LG_ CT027620.13 Danio rerio protein_coding KNOWN, 836 bp
GTATGGATATCTCTCCTATTGACCTGATCAATATTGAGTG
CTTCTCCAGTCGTGTGGTGTCCCTCACAGACTACAGACAG
GAACTGCAAGAGTACCTGAGGTCAAAAATGGGCCAGGTGG
CACCAAATCTCGCAGCTCTCATTGGTGAAGTGGTTGGTGC
TCGCCTGATCTCTCACGCTGGCAGTTTGACAAACCTGGCC
AAATATCCGGCGTCCACCGTGCAGATCCTGGGTGCAGAGA
AGGCCCTGTTCAGGTACTGGGGCTCCCCTTCCCTGCTGGG
GTTTTACACAGCTGCGGTGATGGCAGGGCCGGGGCGGATC
AGGAGCGGGTGATTTGGTGTGTCATTGAACACGCTTTAAG
GTGATCCCGCTCAATCTCCCGTACCCCCCAGTCTGAGCAG
CTGATGAGGGTTTTGAGAGAGCATTGAAGACCAGAGGAAA
CACGCCTAAGTACGGTCTCATTTTCCACTCGACATTCATC
GGGCGCGCAGCTGCCAAAAATAAGGGTCGTATCTCGCGTT
ACTTGGCCAACAAGTGTACCATCGCATCCCGCATTGACTG
CTTTTCTGAGGTTCCCACAAGTGTGTTTGGTGATAAGCTT
CGTGACCAGGTAGAAGAACGTCTGGCCTTCTATGAGACAG
GGGAGGCTCCACGAAAGAATCTGGATGTCATGAAAGAAGC
TGTTGCACAGGCTTCTGAGGTGGCTGCTGAAATAAAGCGG
AAGCTTGAGAAAAAGGAAAAGAAGAAAAAGAAGCGGCAGA
AGAAGCTAGAAGCTCTTTCCACTGCAGAAGGAGATGAGGA
AACCAATGGTGATGTTGAGGAAAATGAAGTCGCCAC

Related Transcripts

Transcripts related to nop56

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	nop56-201	Ensembl	836 nt
aberrant processed transcript	nop56-202 (1) Ensembl	Ensembl	1,134 nt	Select Tool ZFIN BLAST
mRNA	nop56-203 (1) Ensembl	Ensembl	2,039 nt	Select Tool ZFIN BLAST
ncRNA	nop56-003 (1) Ensembl	Ensembl	826 nt	Select Tool ZFIN BLAST
ncRNA	nop56-004 (1) Ensembl	Ensembl	794 nt	Select Tool ZFIN BLAST
ncRNA	nop56-005 (1) Ensembl	Ensembl	799 nt	Select Tool ZFIN BLAST
ncRNA	nop56-007 (1) Ensembl	Ensembl	1,014 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations