Transcript

nop56-003

ID

ZDB-TSCRIPT-090929-18665

Name

nop56-003 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

nop56 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000145194 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000145194.2|gene_biotype:protein_coding|ENSDARG00000012820.12 transcript_biotype:retained_intron gene_symbol:nop56 cdna chromosome:GRCz11:21:11967318:11970185:-1
GTGATCCGAAGAAACGCAACGCTCCTCGTGCGCGGAGCAC
GAGATCGGCAAACATGGTGCTTTTACACGTGTTGTTCGAG
CATGCGGCTGGATATGCGTTGTTGGCTGTTAAAGAAGTGG
AGGAGATTGGCATGCTTCTACCTCAGGTGGAGGAAAGTGT
CCTAAATGTTGGAAAGTTCAGCAGCGTGGTCAAACTGAGT
GCGTTCTTTCCCTTTAAATCCGCCCAGGGTGCATTGGAAA
ACATCAATGCAGTTTCTGAAGGAGTTGTCCATGCAGATCT
TAAGCTTTTTTTGGAGACCAACCTTCCGTCCGGAGGTAAA
AAGAAGCCCATGTTGGGGGTGTCCGATGCTAAGCTTGGAG
CAGCACTTCAGGAAGAACTCAATCTGTCCATTCAGACTGG
AGGTGTGGTAGCTGAAATCATAAGAGGTGAGCATTATTCA
TAATAACAACACTGTTCATTTCAATGGAATCCCATCACCT
GCACCCTACTTTAAGGTCCCACAAAAAATTTAAGTTGTAT
TAATTAATTTTTTATATTAGTCTTAAGGAATATCTTCAAG
CCAGTGTCACATTTAAAAAGTTATAAATGTACAAAGCTTG
TAGTTTGTCACTTAAATGGATCAATTCATTTATTTATTTT
TTTTAAATTACTTCATAGTTCAGTTTATCAACCAATCAAA
TGCTCTCTAGTAACTCTTGTCCTGTCACCTTCAAGACCTT
CTCATTTGCTTTTCATTTGTTGCTTTTAAGCTCAAGCAGA
GCTGTGATTATATTAAACACTATTGCTGTTTTTAAAAAGT
GGGAGGGACTAGCATATCCTCACGTT

OTTDART00000038275 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000038275|OTTDARG00000028183|ZDB-GENE-040109-1 nop56|no_translation nol5a-003 LG_ CT027620.13 Danio rerio protein_coding KNOWN, 826 bp
GTGATCCGAAGAAACGCAACGCTCCTCGTGCGCGGAGCAC
GAGATCGGCAAACATGGTGCTTTTACACGTGTTGTTCGAG
CATGCGGCTGGATATGCGTTGTTGGCTGTTAAAGAAGTGG
AGGAGATTGGCATGCTTCTACCTCAGGTGGAGGAAAGTGT
CCTAAATGTTGGAAAGTTCAGCAGCGTGGTCAAACTGAGT
GCGTTCTTTCCCTTTAAATCCGCCCAGGGTGCATTGGAAA
ACATCAATGCAGTTTCTGAAGGAGTTGTCCATGCAGATCT
TAAGCTTTTTTTGGAGACCAACCTTCCGTCCGGAGGTAAA
AAGAAGCCCATGTTGGGGGTGTCCGATGCTAAGCTTGGAG
CAGCACTTCAGGAAGAACTCAATCTGTCCATTCAGACTGG
AGGTGTGGTAGCTGAAATCATAAGAGGTGAGCATTATTCA
TAATAACAACACTGTTCATTTCAATGGAATCCCATCACCT
GCACCCTACTTTAAGGTCCCACAAAAAATTTAAGTTGTAT
TAATTAATTTTTTATATTAGTCTTAAGGAATATCTTCAAG
CCAGTGTCACATTTAAAAAGTTATAAATGTACAAAGCTTG
TAGTTTGTCACTTAAATGGATCAATTCATTTATTTATTTT
TTTTAAATTACTTCATAGTTCAGTTTATCAACCAATCAAA
TGCTCTCTAGTAACTCTTGTCCTGTCACCTTCAAGACCTT
CTCATTTGCTTTTCATTTGTTGCTTTTAAGCTCAAGCAGA
GCTGTGATTATATTAAACACTATTGCTGTTTTTAAAAAGT
GGGAGGGACTAGCATATCCTCACGTT

Related Transcripts

Transcripts related to nop56

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	nop56-201 (1) Ensembl	Ensembl	836 nt	Select Tool ZFIN BLAST
aberrant processed transcript	nop56-202 (1) Ensembl	Ensembl	1,134 nt	Select Tool ZFIN BLAST
mRNA	nop56-203 (1) Ensembl	Ensembl	2,039 nt	Select Tool ZFIN BLAST
ncRNA	nop56-003	Ensembl	826 nt
ncRNA	nop56-004 (1) Ensembl	Ensembl	794 nt	Select Tool ZFIN BLAST
ncRNA	nop56-005 (1) Ensembl	Ensembl	799 nt	Select Tool ZFIN BLAST
ncRNA	nop56-007 (1) Ensembl	Ensembl	1,014 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations