ZFIN ID: ZDB-GENE-020507-3

ZFIN ID: ZDB-GENE-020507-3

Mapping Details

Gene Name:	VANGL planar cell polarity protein 2
Symbol:	vangl2

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	7	5,324,061 - 5,375,214	GRCz11
Ensembl	7	5,324,061 - 5,375,214	GRCz11
Vega	7	5,202,345 - 5,253,498	GRCv10
NCBI Map Viewer	7	5,327,735 - 5,375,214	GRCz11
NCBI Map Viewer	7	5,327,735 - 5,375,214	GRCz11
UCSC	7	-	GRCz11

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
m209	7	5,328,277	GRCz11	Derrick et al., 2023
sa12076	7	5,338,986	GRCz11	Busch-Nentwich et al., 2013
	7	5,217,270	GRCz10	Busch-Nentwich et al., 2013
	7	6,182,842	Zv9	Busch-Nentwich et al., 2013
sa18862	7	5,338,986	GRCz11	Busch-Nentwich et al., 2013
	7	5,217,270	GRCz10	Busch-Nentwich et al., 2013
	7	6,182,842	Zv9	Busch-Nentwich et al., 2013
la026205Tg	7	6,218,859 - 6,218,869	Zv9
la026206Tg	7	6,218,876 - 6,218,886	Zv9

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z17411	SSLP	7		Jessen et al., 2002	Jessen et al. Nat. Cell Biol. 4(8):610-615 (2002) Supplementary Information, ...
arhgef11	GENE	7		Panizzi et al., 2007	Panizzi et al. Development 134:921-931 (2007) report mapping the arhgef11 gene ...

Chr 7

Panizzi et al. Development 134:921-931 (2007) report mapping the arhgef11 gene to within 100kb of ...

Genomic Feature tk50f is an allele of vangl2

Chr	Location	Mapped As	Panel	Mapped By	Scoring
7	1.9 cM	tk50f	Boston MGH Cross (MGH)	Geisler, Robert	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Genomic Feature sa18862 is an allele of vangl2