ZFIN ID: ZDB-GENE-010716-2

Mapping Details

Gene Name: iroquois homeobox 5a
Symbol: irx5a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 7 35,706,765 - 35,710,263 GRCz11
Ensembl 7 35,706,765 - 35,710,263 GRCz11
Vega 7 35,435,288 - 35,438,786 GRCv10
NCBI Map Viewer 7 35,706,770 - 35,710,263 GRCz11
UCSC 7 - GRCz11
Mapped Clones containing irx5a
DKEY-224N5 Chr: 13 Details
CH211-191G22 Chr: 7 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
el574 7 35,708,614 - 35,708,626 GRCz11 Askary et al., 2015
el576 7 35,708,618 GRCz11 Askary et al., 2015
sa17095 7 35,707,105 GRCz11 Busch-Nentwich et al., 2013
7 35,435,628 GRCz10 Busch-Nentwich et al., 2013
7 37,161,785 Zv9 Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z3903 SSLP 7 Dildrop et al., 2004 Dildrop R et al. (Dev Genes Evol 214, 267-276) mapped the irx5a gene to LG7  ...
z6819 SSLP 7 Dildrop et al., 2004 Dildrop R et al. (Dev Genes Evol 214, 267-276) mapped the irx5a gene to LG7  ...
sall1a GENE 7 Dildrop et al., 2004 Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to  ...
mmp2 GENE 7 Dildrop et al., 2004 Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to  ...
irx6a GENE 7 Dildrop et al., 2004 Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to  ...
fto GENE 7 Dildrop et al., 2004 Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to  ...
irx3a GENE 7 Dildrop et al., 2004 Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to  ...

OTHER MAPPING INFORMATION
Chr 7 Dildrop et al., 2004 Dildrop R et al. (Dev Genes Evol 214, 267-276) mapped the irx5a gene to LG7 between z6819 and z3903  ...
Chr 7 Dildrop et al., 2004 Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to map the irx3a, irx5a,  ...
Genomic Feature el576 is an allele of irx5a