Gene

irx6a

ID
ZDB-GENE-040712-5
Name
iroquois homeobox 6a
Symbol
irx6a Nomenclature History
Previous Names
  • ziro6a (1)
  • zgc:109993
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Predicted to have sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to nucleus. Is expressed in brain; notochord; pharyngeal arch; and retinal ganglion cell layer. Orthologous to human IRX6 (iroquois homeobox 6).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
12 figures from 7 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With irx6a Human Ortholog
No data available
Associated With irx6a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017970 Homeobox, conserved site
Domain IPR001356 Homeodomain
Domain IPR008422 KN homeodomain
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Length Homedomain-like superfamily Homeobox, conserved site Homeodomain KN homeodomain
UniProtKB:A0A8M9Q1J3 496
UniProtKB:A0A8M3AUD2 493
UniProtKB:A0A8M2BG97 505
UniProtKB:Q503Z8 477
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA irx6a-201 (1) Ensembl 2,335 nt
mRNA irx6a-202 (1) Ensembl 1,446 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations