Genomic Feature
re31
- ID
- ZDB-ALT-221205-3
- Name
- re31
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Barakat Lab
- Current Source
- Other Pages
-
Notes
| Comment | Citation |
|---|---|
| 5bp deletion in exon 1 (ENSDART00000122559.4, c.33-37del) | Zebrafish Nomenclature Committee |
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 25: 36217396 - 36217400 (GRCz11) (1) Details
- Nucleotide change
- TAGGC/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp deleted in Exon 1 (1)
- Transcript Consequence
- Frameshift, Premature Stop (2)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TTGTTCAACAGTCCCTATATTGTTTACAACGCTAATTTGAATGTTCGGCCTGACATCACATGCAAGTATGACTTTAAAACAACATTAGCATCATTTAAATGACCAATAATGTTGTACTTGGATAGCCATTGGCTGCTAATATGATTTCTCTATTTGTAATTTGCAAATAATACTTTTCTGAAATTATATCATTAGGGAGAATGTTTGAATGTGCGAATATAAGATCAAGTTTACCTCAATTATCTAAAATATACAGGACACTGGCCCATGTTTGAGCACCTTTAAAGACTGCTTCTCACCCACCCAAACAAACAGGCTGTCAGTGATGAGGTGCAGCAGGACGCCGGTGGCCACATTTCCCAGATTCTCCAGCTTCAGCTCCTCATTCTGGGGCCCTTCACTGAGGGCAGAGCTGAACTCTGAGTCTCTGACGGTGCTATAGGCACTCAGGACGGTCCCGGCCAGCAGGAGGGCTGACAGGGCCGTGTATGTCTGCAAAC
TAGGC/- CAGGGGAAACGCTCCAGAAACAGCAGAGGCATTCTGACCACAGATCAGCTCAGATCCACAGTCCACACGTACAGCAGTCTTCTGAACTCTGCTCCAGGAGAAACCTGATGATGTCCTTTTACTGATGGTGACAGTCTGAGTCCTTCACAATTCAAACTTCTCTTAAATACACACAGATATCAAGATTTAGGCTTGTTTACATTTGCACGGCGGCTTGCTGTGATGTGTCAACAACTTAAAAGACACGTAACGTTAGAATTAACACGGAAGACTGTTTAAACACACGCTTAAAACACAATATGTCATTTTGAACTACGTTTAAACGACATTTCGATAAACAAACCATCAAGTCGAGTCGTTAGTAAATATGTACATTGCAAAGAAACAAAACGGTCTCTTATATTTTAAACGTTAGCATGAATGCTAATCTGCTTGAGCCGCGGACTGCTTCAAACGCGACGAACTCGTCTGACTTAGTTTAAACGCGTCCCATGATGCTA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None