Genomic Feature

la490

ID
ZDB-ALT-200528-3
Name
la490
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Shuo Lin Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 16
Variants
Variant Type
Small Deletion
Variant Location
Chr 16: 31923353 - 31923359 (GRCz11) (1) Details
Nucleotide change
TGCTGGA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AAGACGTCCTTTTGAGAAGTCACGTCTTGACCAGGAGTTAAGACTCATTGGTGAGCGCAAAGTTGAAAATAAAATGATTATTAATGTTTTTTTCCCCAAAAACGTGTTTCTTACAAAAAAAAACGTGTTTCTTACAATTGTCTTACAATTTTACCTGCCACAGGTGAGTATGGTCTCAGGAATAAGAGAGAAGTCTGGAGGGTGAAGTTCACTCTGGCCAAAATCCGCAAGGCTGCCAGAGAGCTGCTCACTCTGGATGAGAAGGATCCTAAGCGTCTCTTTGAAGGTAACTGAACTGTGACTGTCGTTCAAGACTGGGTGGCCAATGATTAAAATAATGCTTGTCAGATTGTCAGTGTTGCCAAGAATTCCTCGTCAATGAGGCCATATCTGCCAATACATCCTTACTGGTTCTTTATCACACTTGTTTAACATAACAATATTTTGTGATTATTATTTTTAAGGTAATGCTCTGCTCAGGCGTCTGGTGCGTATTGGAG
TGCTGGA/- TGAGGGAAAGATGAAGCTCGATTACATTCTGGGCCTGAAAGTGGAGGATTTCTTGGAGAGGAGGTTGCAGACTCAAGTCTTCAAGCTTGGGCTGGCCAAGAGTATCCACCATGCACGTGTGCTCATTCGTCAGAGGCACATCCGGTAAGATTTAGGAAGCACAGGTTTAAAACTCAAATAGAACAGGATTTTGAAATGTTTAATCCTCTGGTGCTGCTTTCTCTAGTCTTAAGTTTTAGTTCGACTTTTTAGATTTATAGAAGCAAATTATTTGTCTTTTGCTAACTACATGTGCAAAGAACAATCTTAAATTATATATATATTTATGGCAGATTGCTCAAGTTAAAGAACTGATATCAAACACATTCAGTCTTATTAGATGTTTTTCTAAAGTTGTTTTTAATAATGATCAAAGTTGGTTGACATTTGAGCTTGAGATCTATGAAATGGATTTAAACTTAGGGTGCAGTACCAAACAGCTACTAAACATTTTACTTTTT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
rps9la490/la490 (AB)Homozygous♀+/- ♂+/-5 figures with image from Chen et al., 20193 figures with image from Chen et al., 2019
rps9la490/la490; cz3325Tg (AB)ComplexFigure 3 with image from Chen et al., 2019Figure 3 with image from Chen et al., 2019
rps9la490/la490 + MO4-tp53 (AB)ComplexFigure 5 with image from Chen et al., 2019Figure 5 with image from Chen et al., 2019
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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