Transcript

ottdart00000058586

ID

ZDB-TSCRIPT-130528-135

Name

ottdart00000058586 Nomenclature History

Previous Names

rp71-3c13.3-003

Transcript Type

lincRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

si:rp71-3c13.3 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

RNAcentral:URS0000A7E830 (1)

Note

None

Sequence

ENSDART00000153132 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000153132.2|gene_biotype:lincRNA|ENSDARG00000092341.4 transcript_biotype:lincRNA  ncrna chromosome:GRCz11:4:15135556:15140202:-1
ATGTACTGCTGTAAATCAAGACTACCAGTTTGTGAGCTGA
TATGCAGTGGAAATTGACATCCAGAAGGAAGTCATAGAGG
AAACACCAGCTGATGCAAGTGCTGCAGAAGAATTCAATCG
AATATCAGGAAGAAATGTGAGATCCAAGTTCTACGCTGCA
TTGGACACACACTGCTCGTTTGATTGAAATAAAAAAAAAA
AAAAACAGGAGAAAATTGCAGAAGAAAACTAGAAGAAATT
TTCAACATGTTAATTCAAAGGTCATCTGGCAGCAGTTTTC
CGGGGTCTTTCAGTCCTTTAGAGGGATGAGTCTAAAGAAA
TTTTCAGGATGTGTTTTGATGTAATTGTAGAGTCGGACTT
CAGTGCAGAAGATGTTGGCCTGCTGACTGTCGTGTGTGAA
GATGTCTAAAGAACCTCATTATGGATGCAATGTGGGCCTT
TATACTGGAAGGAAAAGTGGTTATGGACTTTGCCACATGC
AGTATGTCTCTTTTTTTG

OTTDART00000058586 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000058586|OTTDARG00000001283|ZDB-GENE-030616-68 si:rp71-3c13.3|no_translation RP71-3C13.3-003 LG_ AL590150.2 Danio rerio lincRNA NOVEL, 498 bp
ATGTACTGCTGTAAATCAAGACTACCAGTTTGTGAGCTGA
TATGCAGTGGAAATTGACATCCAGAAGGAAGTCATAGAGG
AAACACCAGCTGATGCAAGTGCTGCAGAAGAATTCAATCG
AATATCAGGAAGAAATGTGAGATCCAAGTTCTACGCTGCA
TTGGACACACACTGCTCGTTTGATTGAAATAAAAAAAAAA
AAAAACAGGAGAAAATTGCAGAAGAAAACTAGAAGAAATT
TTCAACATGTTAATTCAAAGGTCATCTGGCAGCAGTTTTC
CGGGGTCTTTCAGTCCTTTAGAGGGATGAGTCTAAAGAAA
TTTTCAGGATGTGTTTTGATGTAATTGTAGAGTCGGACTT
CAGTGCAGAAGATGTTGGCCTGCTGACTGTCGTGTGTGAA
GATGTCTAAAGAACCTCATTATGGATGCAATGTGGGCCTT
TATACTGGAAGGAAAAGTGGTTATGGACTTTGCCACATGC
AGTATGTCTCTTTTTTTG

Related Transcripts

Transcripts related to si:rp71-3c13.3

Type	Name	Annotation Method	Length (nt)	Analysis
lincRNA	ottdart00000058586	Ensembl	498 nt
lincRNA	si:rp71-3c13.3-001 (1) Ensembl	Ensembl	1,082 nt	Select Tool
lincRNA	si:rp71-3c13.3-002 (1) Ensembl	Ensembl	667 nt	Select Tool
ncRNA	ottdart00000002276 (1)	Havana	779 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000002277 (1)	Havana	1,401 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:rp71-3c13.3-003 (1)	Havana	1,524 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations