Transcript

si:rp71-3c13.3-002

ID

ZDB-TSCRIPT-090929-9

Name

si:rp71-3c13.3-002 Nomenclature History

Previous Names

ottdart00000001384
rp71-3c13.3-002

Transcript Type

lincRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

si:rp71-3c13.3 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

RNAcentral:URS0000A98DB9 (1)

Note

None

Sequence

ENSDART00000132258 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000132258.4|gene_biotype:lincRNA|ENSDARG00000092341.4 transcript_biotype:lincRNA  ncrna chromosome:GRCz11:4:15135285:15140224:-1
GACAGGATTTCATATTGAGAAGATGTACTGCTGTAAATCA
AGACTACCAGTTTGTGAGCTGATATGCAGTGGAAATTGAC
ATCCAGAAGGAAGTCATAGAGGAAACACCAGCTGATGCAA
GTGCTGCAGAAGAATTCAATCGAATATCAGGAAGAAATGT
CATCTGGCAGCAGTTTTCCGGGGTCTTTCAGTCCTTTAGA
GGGATGAGTCTAAAGAAATTTTCAGGATGTGTTTTGATGT
AATTGTAGAGTCGGACTTCAGTGCAGAAGATGTTGGCCTG
CTGACTGTCGTGTGTGAAGATGTCTAAAGAACCTCATTAT
GGATGCAATGTGGGCCTTTATACTGGAAGGAAAAGTGGTT
ATGGACTTTGCCACATGCAGTATGTCTCTTTTTTTGCTTT
GATTTACACACTGAATTCGGACTACCCAAAGACTTTGAGC
AATGCATTTGAATTTGTTCAATGTGTGTTGCTTTTGCTGG
GAGGGAAGCGTAATGTGTTTTATTCGGCGAGTGCCTATAT
ACTGCTGTGCTTTATGTTTAAAGGTTCAGGTATAATGGCA
TGTTTAATTACAAAGTGTTGCTTTTTAACATGTTGCTGTT
TGCAGTGTTACATTTAGGACTGCAGCATTTTGGTGTTTAA
AACACTTTTTTTTTTTTTACCAAAAAA

OTTDART00000001384 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000001384|OTTDARG00000001283|ZDB-GENE-030616-68 si:rp71-3c13.3|no_translation RP71-3C13.3-002 LG_ AL590150.2 Danio rerio lincRNA NOVEL, 667 bp
GACAGGATTTCATATTGAGAAGATGTACTGCTGTAAATCA
AGACTACCAGTTTGTGAGCTGATATGCAGTGGAAATTGAC
ATCCAGAAGGAAGTCATAGAGGAAACACCAGCTGATGCAA
GTGCTGCAGAAGAATTCAATCGAATATCAGGAAGAAATGT
CATCTGGCAGCAGTTTTCCGGGGTCTTTCAGTCCTTTAGA
GGGATGAGTCTAAAGAAATTTTCAGGATGTGTTTTGATGT
AATTGTAGAGTCGGACTTCAGTGCAGAAGATGTTGGCCTG
CTGACTGTCGTGTGTGAAGATGTCTAAAGAACCTCATTAT
GGATGCAATGTGGGCCTTTATACTGGAAGGAAAAGTGGTT
ATGGACTTTGCCACATGCAGTATGTCTCTTTTTTTGCTTT
GATTTACACACTGAATTCGGACTACCCAAAGACTTTGAGC
AATGCATTTGAATTTGTTCAATGTGTGTTGCTTTTGCTGG
GAGGGAAGCGTAATGTGTTTTATTCGGCGAGTGCCTATAT
ACTGCTGTGCTTTATGTTTAAAGGTTCAGGTATAATGGCA
TGTTTAATTACAAAGTGTTGCTTTTTAACATGTTGCTGTT
TGCAGTGTTACATTTAGGACTGCAGCATTTTGGTGTTTAA
AACACTTTTTTTTTTTTTACCAAAAAA

Related Transcripts

Transcripts related to si:rp71-3c13.3

Type	Name	Annotation Method	Length (nt)	Analysis
lincRNA	ottdart00000058586 (1) Ensembl	Ensembl	498 nt	Select Tool
lincRNA	si:rp71-3c13.3-001 (1) Ensembl	Ensembl	1,082 nt	Select Tool
lincRNA	si:rp71-3c13.3-002	Ensembl	667 nt
ncRNA	ottdart00000002276 (1)	Havana	779 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000002277 (1)	Havana	1,401 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:rp71-3c13.3-003 (1)	Havana	1,524 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations