Transcript

rbm39a-007

ID

ZDB-TSCRIPT-091110-247

Name

rbm39a-007 Nomenclature History

Previous Names

dkey-121h17.6-001
ottdart00000043449

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

rbm39a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000134009 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000134009.2|gene_biotype:protein_coding|ENSDARG00000011613.10 transcript_biotype:retained_intron gene_symbol:rbm39a cdna chromosome:GRCz11:11:24340031:24343193:1
ATGTACAGTTTGGGGGCTATTTTGAGATACGGTTCATTTA
AATATCCTATACTGTTAAATGTTGTTTATGTATTAAGTTT
AACACTCAAACAGCTGTAAAAACACAATTTTCCTCGTTTG
CAGATCAACAACAACAACATGGCCGATGATTTGGACATTG
AAGCAATGCTCGAGGCTCCATATAAAAAGACTTGCCTATA
TCTCACCTCTACTCCCATGAATTCCAGTGTGAACTGTCAA
AAAAATGAAGGATGACAACAAGTCCTTAAGTACCAATGGC
CACGAGGAGCGGAGCAAGAAAAAAAAGAGGAGCAAAAGTC
GCAGCCGGAGTCGGGACAGGAAGAGAAGCAAGAGTCGCGA
GCGCAAAAAGAGTCATGACCGGAGGAGGAGCCGCAGCAGA
GACCGGAAGCGCAGCCGCAGCAAGGAGAGACGTCGCAGCC
GTTCTCGGAGCAGGGAGCGCGGCGGTCGCTACAGAGCTCC
ATTTTCTGGCCTGAAATTTAACGGTGGTCCCAGGGGGAAG
ACTGGCCCACCACCTGCCATCAAACTAAGTCGAAGAAGGT
CTAGAAGCCGAAGTCCTTTCAAGAAAGATAGAAGCCCTGT
AAGACAGCCCATTGACAATCTCACCCCTGAGGAAAGAGAT
GCTCGCACAGTGTTCTGTATGCAGCTGGCAGCCAGAATCC
GGCCACGAGACCTAGAAGAATTCTTTTCTGCAGTTGGAAA
AGTACGAGATGTGCGAATCATCTCTGACCGAAACTCCAGA
AGATCCAAAGGAATTGCTTACATTGAGTTTGTGGATTCCA
CATCTGTACCCCTGGCAATTGGTCTA

OTTDART00000043449 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043449|OTTDARG00000008479|ZDB-GENE-040426-2852 rbm39a|no_translation rbm39a-007 LG_ BX001056.7 Danio rerio protein_coding KNOWN, 826 bp
ATGTACAGTTTGGGGGCTATTTTGAGATACGGTTCATTTA
AATATCCTATACTGTTAAATGTTGTTTATGTATTAAGTTT
AACACTCAAACAGCTGTAAAAACACAATTTTCCTCGTTTG
CAGATCAACAACAACAACATGGCCGATGATTTGGACATTG
AAGCAATGCTCGAGGCTCCATATAAAAAGACTTGCCTATA
TCTCACCTCTACTCCCATGAATTCCAGTGTGAACTGTCAA
AAAAATGAAGGATGACAACAAGTCCTTAAGTACCAATGGC
CACGAGGAGCGGAGCAAGAAAAAAAAGAGGAGCAAAAGTC
GCAGCCGGAGTCGGGACAGGAAGAGAAGCAAGAGTCGCGA
GCGCAAAAAGAGTCATGACCGGAGGAGGAGCCGCAGCAGA
GACCGGAAGCGCAGCCGCAGCAAGGAGAGACGTCGCAGCC
GTTCTCGGAGCAGGGAGCGCGGCGGTCGCTACAGAGCTCC
ATTTTCTGGCCTGAAATTTAACGGTGGTCCCAGGGGGAAG
ACTGGCCCACCACCTGCCATCAAACTAAGTCGAAGAAGGT
CTAGAAGCCGAAGTCCTTTCAAGAAAGATAGAAGCCCTGT
AAGACAGCCCATTGACAATCTCACCCCTGAGGAAAGAGAT
GCTCGCACAGTGTTCTGTATGCAGCTGGCAGCCAGAATCC
GGCCACGAGACCTAGAAGAATTCTTTTCTGCAGTTGGAAA
AGTACGAGATGTGCGAATCATCTCTGACCGAAACTCCAGA
AGATCCAAAGGAATTGCTTACATTGAGTTTGTGGATTCCA
CATCTGTACCCCTGGCAATTGGTCTA

Related Transcripts

Transcripts related to rbm39a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	rbm39a-209 (1) Ensembl	Ensembl	2,591 nt	Select Tool
mRNA	rbm39a-201 (1) Ensembl	Ensembl	2,366 nt	Select Tool
mRNA	rbm39a-202 (1) Ensembl	Ensembl	546 nt	Select Tool
mRNA	rbm39a-203 (1) Ensembl	Ensembl	790 nt	Select Tool
mRNA	rbm39a-205 (1) Ensembl	Ensembl	2,280 nt	Select Tool
mRNA	rbm39a-213 (1) Ensembl	Ensembl	5,601 nt	Select Tool ZFIN BLAST
mRNA	rbm39a-214 (1) Ensembl	Ensembl	1,604 nt	Select Tool ZFIN BLAST
ncRNA	rbm39a-002 (1) Ensembl	Ensembl	2,848 nt	Select Tool
ncRNA	rbm39a-003 (1) Ensembl	Ensembl	817 nt	Select Tool
ncRNA	rbm39a-005 (1) Ensembl	Ensembl	1,818 nt	Select Tool
ncRNA	rbm39a-007	Ensembl	826 nt
ncRNA	rbm39a-008 (1) Ensembl	Ensembl	843 nt	Select Tool
ncRNA	rbm39a-010 (1) Ensembl	Ensembl	769 nt	Select Tool
ncRNA	rbm39a-011 (1) Ensembl	Ensembl	720 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations