Transcript

rbm39a-005

ID

ZDB-TSCRIPT-090929-1591

Name

rbm39a-005 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

rbm39a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000148153 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000148153.3|gene_biotype:protein_coding|ENSDARG00000011613.10 transcript_biotype:processed_transcript gene_symbol:rbm39a cdna chromosome:GRCz11:11:24339385:24342063:1
GTGCACGCGCAGGGATTGTTTGCCGCCAGTTTGCGTGGAT
TCGAATCAATCGACCAGGGTTGCAACTGTAGCTGAAACGG
ACCGTAGATCCGGGATTTACCGCTCGTTTGTGGAGCCAAG
ACTGTGACGCTCTGTAGGCCGCAGTGTAACGTTTTAAGAT
CAACAACAACAACATGGCCGATGATTTGGACATTGAAGCA
ATGCTCGAGGCTCCATATAAAAAGACTTGCCTATATCTCA
CCTCTACTCCCATGAATTCCAGTGTGAACTGTCAAAAAAA
TGAAGGTAGTAATTGCCCAATATATTGATGTACTGTGGTA
CCCTTGGTTGAAATACATAGGCAAAATTGATACATAGGTA
CCGCCAGAATAAATGCAGTGGATGAACATAAAGATCTGGT
ATAAACTCTGTGGAGACTGTATTTGTTATTGTATGCATGG
TTTTCTTAGCTTTTACAAGGAAGTTTTTCTTCCATAATGG
CTAGAATAATGCTGCATGTTTTATAGTATAAACATATGGG
AGGTATCCACTGAAAATATATTGGTCTAAAATGTCATAAT
CTTAGTGCAGAAATCCTGGAGTTGACGTATCCAAGCAAAT
CCACAGAGTCTCGTTATTCATGGATTTGAAAATAAACCAA
AATAAAAGGGGTAGTTCACCTAAAAATAAAAATGTGCTGT
TCTCACACACACATGCCATCCTAGATGTAGGTGTAGTTTT
CTTCCTACTTCTGTTAAAGATTAAAGAATATTTTTATTCA
TCTAAAAGCGCCGGAAGCTGTTGACTTGAATTTTTTTTTA
ATCATTAAGGACCACAGCTTCAGGTAAAAAAATTATATTC
TAAAGAAGATACCAACATCTTGGATGGCCCGAGGGTGACT
GAGTTAACAGCAGGTTTGTGTTTTTGGTTAACTATTTATA
ATAAAATGTATATGTCATATTTTAGTTATGCATGCTGCTG
ACATTTAAAAATACTTGTTAATGGTTATTTTGCGATTTTA
CAAGCGGGGAATGATGGGGCTCAGCATTTAATGTCATAAA
GATACTGTAAAATACATTTATCATGTAAATCGTCTAGCCT
CTTAACAACAACAAAAGATCAACTCAACTTTAGATGGTCT
GTGGGAGTCGCTATTACTAAGCCGTGTGAATCCCTGTTTG
CTTCAGGGCGAGATGTGTGACTGAGGTGGCATCGAGCTCT
TTCAATCCACGAAGGCATATGGGGTGAAGATCACTGGAAT
GGCATCCACCACTGGAGCTCGTTTAGTGGCTGGCTGCTAG
CGTTGCCACTTTGGGTCTTAGGCTCAGATAGCCTTGGTAC
TGAAACTGTTGGGCTGCTTAATGAATGATGTCTTTAAAAA
AAAAATCAATGCTGCTTTACATACCCAGCATAGCACTAGC
AATGTTTGGCCGTTTCACACAAGTAATGCAAGCACAAGTA
AGGAAGAACGACATTGGCAGCCTTGTGGTTGCTTTCTAAA
GGTCCCCCTTGTATTTGTCGTCCTCCCACACAAACCCTGT
AATGAACTCTTATTTAATGATCATATCATATTCTCTTTTG
TTCCCATCCCTTCTTTATCCTTACGACTTGAAATGTTTCG
CCGTCCTCCTCATGCTGTCTTCTATCGACCCTGCTTAGGA
TGACAACAAGTCCTTAAGTACCAATGGCCACGAGGAGCGG
AGCAAGAAAAAAAAGAGGAGCAAAAGTCGCAGCCGGAGTC
GGGACAGGAAGAGAAGCAAGAGTCGCGAGCGCAAAAAGAG
TCATGACCGGAGGAGGAGCCGCAGCAGAGACCGGAAGCGC
AGCCGCAGCAAGGAGAGA

OTTDART00000009733 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000009733|OTTDARG00000008479|ZDB-GENE-040426-2852 rbm39a|no_translation rbm39a-005 LG_ BX001056.7 Danio rerio protein_coding KNOWN, 1818 bp
GTGCACGCGCAGGGATTGTTTGCCGCCAGTTTGCGTGGAT
TCGAATCAATCGACCAGGGTTGCAACTGTAGCTGAAACGG
ACCGTAGATCCGGGATTTACCGCTCGTTTGTGGAGCCAAG
ACTGTGACGCTCTGTAGGCCGCAGTGTAACGTTTTAAGAT
CAACAACAACAACATGGCCGATGATTTGGACATTGAAGCA
ATGCTCGAGGCTCCATATAAAAAGACTTGCCTATATCTCA
CCTCTACTCCCATGAATTCCAGTGTGAACTGTCAAAAAAA
TGAAGGTAGTAATTGCCCAATATATTGATGTACTGTGGTA
CCCTTGGTTGAAATACATAGGCAAAATTGATACATAGGTA
CCGCCAGAATAAATGCAGTGGATGAACATAAAGATCTGGT
ATAAACTCTGTGGAGACTGTATTTGTTATTGTATGCATGG
TTTTCTTAGCTTTTACAAGGAAGTTTTTCTTCCATAATGG
CTAGAATAATGCTGCATGTTTTATAGTATAAACATATGGG
AGGTATCCACTGAAAATATATTGGTCTAAAATGTCATAAT
CTTAGTGCAGAAATCCTGGAGTTGACGTATCCAAGCAAAT
CCACAGAGTCTCGTTATTCATGGATTTGAAAATAAACCAA
AATAAAAGGGGTAGTTCACCTAAAAATAAAAATGTGCTGT
TCTCACACACACATGCCATCCTAGATGTAGGTGTAGTTTT
CTTCCTACTTCTGTTAAAGATTAAAGAATATTTTTATTCA
TCTAAAAGCGCCGGAAGCTGTTGACTTGAATTTTTTTTTA
ATCATTAAGGACCACAGCTTCAGGTAAAAAAATTATATTC
TAAAGAAGATACCAACATCTTGGATGGCCCGAGGGTGACT
GAGTTAACAGCAGGTTTGTGTTTTTGGTTAACTATTTATA
ATAAAATGTATATGTCATATTTTAGTTATGCATGCTGCTG
ACATTTAAAAATACTTGTTAATGGTTATTTTGCGATTTTA
CAAGCGGGGAATGATGGGGCTCAGCATTTAATGTCATAAA
GATACTGTAAAATACATTTATCATGTAAATCGTCTAGCCT
CTTAACAACAACAAAAGATCAACTCAACTTTAGATGGTCT
GTGGGAGTCGCTATTACTAAGCCGTGTGAATCCCTGTTTG
CTTCAGGGCGAGATGTGTGACTGAGGTGGCATCGAGCTCT
TTCAATCCACGAAGGCATATGGGGTGAAGATCACTGGAAT
GGCATCCACCACTGGAGCTCGTTTAGTGGCTGGCTGCTAG
CGTTGCCACTTTGGGTCTTAGGCTCAGATAGCCTTGGTAC
TGAAACTGTTGGGCTGCTTAATGAATGATGTCTTTAAAAA
AAAAATCAATGCTGCTTTACATACCCAGCATAGCACTAGC
AATGTTTGGCCGTTTCACACAAGTAATGCAAGCACAAGTA
AGGAAGAACGACATTGGCAGCCTTGTGGTTGCTTTCTAAA
GGTCCCCCTTGTATTTGTCGTCCTCCCACACAAACCCTGT
AATGAACTCTTATTTAATGATCATATCATATTCTCTTTTG
TTCCCATCCCTTCTTTATCCTTACGACTTGAAATGTTTCG
CCGTCCTCCTCATGCTGTCTTCTATCGACCCTGCTTAGGA
TGACAACAAGTCCTTAAGTACCAATGGCCACGAGGAGCGG
AGCAAGAAAAAAAAGAGGAGCAAAAGTCGCAGCCGGAGTC
GGGACAGGAAGAGAAGCAAGAGTCGCGAGCGCAAAAAGAG
TCATGACCGGAGGAGGAGCCGCAGCAGAGACCGGAAGCGC
AGCCGCAGCAAGGAGAGA

Related Transcripts

Transcripts related to rbm39a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	rbm39a-209 (1) Ensembl	Ensembl	2,591 nt	Select Tool
mRNA	rbm39a-201 (1) Ensembl	Ensembl	2,366 nt	Select Tool
mRNA	rbm39a-202 (1) Ensembl	Ensembl	546 nt	Select Tool
mRNA	rbm39a-203 (1) Ensembl	Ensembl	790 nt	Select Tool
mRNA	rbm39a-205 (1) Ensembl	Ensembl	2,280 nt	Select Tool
mRNA	rbm39a-213 (1) Ensembl	Ensembl	5,601 nt	Select Tool ZFIN BLAST
mRNA	rbm39a-214 (1) Ensembl	Ensembl	1,604 nt	Select Tool ZFIN BLAST
ncRNA	rbm39a-002 (1) Ensembl	Ensembl	2,848 nt	Select Tool
ncRNA	rbm39a-003 (1) Ensembl	Ensembl	817 nt	Select Tool
ncRNA	rbm39a-005	Ensembl	1,818 nt
ncRNA	rbm39a-007 (1) Ensembl	Ensembl	826 nt	Select Tool
ncRNA	rbm39a-008 (1) Ensembl	Ensembl	843 nt	Select Tool
ncRNA	rbm39a-010 (1) Ensembl	Ensembl	769 nt	Select Tool
ncRNA	rbm39a-011 (1) Ensembl	Ensembl	720 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations