Transcript

rbm39a-209

ID
ZDB-TSCRIPT-091110-1703
Name
rbm39a-209 Nomenclature History
Previous Names
  • rbm39a-009
  • dkey-261o10.1-001
  • ottdart00000043451
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000138314 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000138314.4|gene_biotype:protein_coding|ENSDARG00000011613.10 transcript_biotype:nonsense_mediated_decay gene_symbol:rbm39a cdna chromosome:GRCz11:11:24339362:24345423:1
CTTCTTATGCAACAAGACGAGACGTGCACGCGCAGGGATT
GTTTGCCGCCAGTTTGCGTGGATTCGAATCAATCGACCAG
GGTTGCAACTGTAGCTGAAACGGACCGTAGATCCGGGATT
TACCGCTCGTTTGTGGAGCCAAGACTGTGACGCTCTGTAG
GCCGCAGTGTAACGTTTTAAGATCAACAACAACAACATGG
CCGATGATTTGGACATTGAAGCAATGCTCGAGGCTCCATA
TAAAAAGACTTGCCTATATCTCACCTCTACTCCCATGAAT
TCCAGTGTGAACTGTCAAAAAAATGAAGGGCGAGATGTGT
GACTGAGGTGGCATCGAGCTCTTTCAATCCACGAAGGCAT
ATGGGGTGAAGATCACTGGAATGGCATCCACCACTGGAGC
TCGTTTAGTGGCTGGCTGCTAGCGTTGCCACTTTGGGTCT
TAGGCTCAGATAGCCTTGGATGACAACAAGTCCTTAAGTA
CCAATGGCCACGAGGAGCGGAGCAAGAAAAAAAAGAGGAG
CAAAAGTCGCAGCCGGAGTCGGGACAGGAAGAGAAGCAAG
AGTCGCGAGCGCAAAAAGAGTCATGACCGGAGGAGGAGCC
GCAGCAGAGACCGGAAGCGCAGCCGCAGCAAGGAGAGACG
TCGCAGCCGTTCTCGGAGCAGGGAGCGCGGCGGTCGCTAC
AGAGCTCCATTTTCTGGCCTGAAATTTAACGGTGGTCCCA
GGGGGAAGACTGGCCCACCACCTGCCATCAAACTAAGTCG
AAGAAGGTCTAGAAGCCGAAGTCCTTTCAAGAAAGATAGA
AGCCCTGTAAGACAGCCCATTGACAATCTCACCCCTGAGG
AAAGAGATGCTCGCACAGTGTTCTGTATGCAGCTGGCAGC
CAGAATCCGGCCACGAGACCTAGAAGAATTCTTTTCTGCA
GTTGGAAAAGTCTGTTTGTTTCACTTTGGACAACTTTGAC
CCGTTTCCCCACTAAGCTTGGATTCTAATTGATTATGTTT
TTCTTTTAAGGTACGAGATGTGCGAATCATCTCTGACCGA
AACTCCAGAAGATCCAAAGGAATTGCTTACATTGAGTTTG
TGGATTCCACATCTGTACCCCTGGCAATTGGTCTATCTGG
ACAAAGGCTTCTTGGAGTACCAATCATTGTCCAGGCTTCA
CAGGCTGAGAAGAACAGAGCCGCTGCATTGGCCAATAACT
TGCAGAAGGGCAGCGCAGGACCCATGAGGCTCTATGTTGG
CTCATTGCATTTCAACATCACAGAAGACATGCTCCGAGGC
ATTTTTGAACCATTTGGAAGAATTGATAGTATCCAACTGA
TGATGGACAGTGAAACAGGACGATCTAAAGGATATGGTTT
TATCACATTTTCTGATGCTGAATGTGCAAAGAAGGCACTG
GAACAGCTTAATGGCTTTGAGTTGGCTGGTAGACCAATGA
AAGTGGGACATGTGACGGAGCGCACAGATGCCTCCACCGC
CAGCTCCTTCCTGGACAACGATGAGCTAGAAAGAACCGGT
ATTGATCTGGGGACTACAGGAAGACTTCAACTCATGGCCA
GATTAGCTGAGGGAACTGGTTTGCAGATCCCGCCCGCTGC
ACAACAGGCCCTTCAGATGAGTGGCTCCATGGTTGCCATG
GCTGCAGCTACTGCTGCTATGAACCCTGGATTGAGTTTTA
ACATCAATGTGCCAACAAACCAAGCCTTGAATTTACCATC
ACAACCCATCGCAACACACTGTTTCCAGCTGTCCAACATG
TTCAATCCAAACTCAGAAAATGATCATGGTTGGGAAATCG
AAATTCAGGATGATGTCATTGAAGAGTGCAACAAACACGG
TGGAGTCATACACATATATGTGGACAAGAAATCTGCTGAA
GGTAATGTCTATGTGAAGTGTCCCACCATTCCTGCTGCCA
TGGCTGCAGTCAGTGCGCTACATGGACGCTGGTTTGGAGG
TAAAATGATCACAGCAGCTTATGTCCCGCTTCCTACATAC
CACAACCTTTTCCCAGAGTCAGTGCAGGCCACACAGCTTC
TAATCCCCAGTCGTCGGTGATCAATCACCACTGTACAACT
CCACTTTTTCAGCCTTGCTCTTTTTAACTTTTGGACAATA
ATAACAGTTCTGCAAGTTGTGGCACAGGTGTGGTAAGGTA
AAGTTTCACTTGCATACTGTCCTTACAGGTCATGGACAAG
TTCTGTGGTTAAAAAAAATCCTATGTACAGCCTACTTATT
GAATTTTGCTTCTTGATCTTTTATTGTTGGTACATATTTG
TTTTTCTCTTCCACATTTATTGTCTCTGTGAAAGATCTGA
TTGGTATGTTTATCACTCGAGGTAGTGTATAATAATACCA
GAAACGCAGTATAAGTAAGTCTTGGATTCAAACTCTTCAA
TTTTGATCAAATGTCAACATATTCAACTTTTTGGCTCTAT
GAGCTGTGGGAACTAAATGGCTGACAAATATCTTTTGTTC
ATTTAGAGACCACGAGGTTTAGAAACATCTTGTTTTTCTA
ATCAAGATTTTGATTTTTGTAAAGTTCTTGATGAAAAGTT
CATTTCAAATAAAGCAGAGATAACTGAAATA

OTTDART00000043451 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000043451|OTTDARG00000008479|ZDB-GENE-040426-2852 rbm39a|OTTDARP00000034448 rbm39a-009 LG_ BX001056.7 Danio rerio protein_coding KNOWN, 2591 bp
CTTCTTATGCAACAAGACGAGACGTGCACGCGCAGGGATT
GTTTGCCGCCAGTTTGCGTGGATTCGAATCAATCGACCAG
GGTTGCAACTGTAGCTGAAACGGACCGTAGATCCGGGATT
TACCGCTCGTTTGTGGAGCCAAGACTGTGACGCTCTGTAG
GCCGCAGTGTAACGTTTTAAGATCAACAACAACAACATGG
CCGATGATTTGGACATTGAAGCAATGCTCGAGGCTCCATA
TAAAAAGACTTGCCTATATCTCACCTCTACTCCCATGAAT
TCCAGTGTGAACTGTCAAAAAAATGAAGGGCGAGATGTGT
GACTGAGGTGGCATCGAGCTCTTTCAATCCACGAAGGCAT
ATGGGGTGAAGATCACTGGAATGGCATCCACCACTGGAGC
TCGTTTAGTGGCTGGCTGCTAGCGTTGCCACTTTGGGTCT
TAGGCTCAGATAGCCTTGGATGACAACAAGTCCTTAAGTA
CCAATGGCCACGAGGAGCGGAGCAAGAAAAAAAAGAGGAG
CAAAAGTCGCAGCCGGAGTCGGGACAGGAAGAGAAGCAAG
AGTCGCGAGCGCAAAAAGAGTCATGACCGGAGGAGGAGCC
GCAGCAGAGACCGGAAGCGCAGCCGCAGCAAGGAGAGACG
TCGCAGCCGTTCTCGGAGCAGGGAGCGCGGCGGTCGCTAC
AGAGCTCCATTTTCTGGCCTGAAATTTAACGGTGGTCCCA
GGGGGAAGACTGGCCCACCACCTGCCATCAAACTAAGTCG
AAGAAGGTCTAGAAGCCGAAGTCCTTTCAAGAAAGATAGA
AGCCCTGTAAGACAGCCCATTGACAATCTCACCCCTGAGG
AAAGAGATGCTCGCACAGTGTTCTGTATGCAGCTGGCAGC
CAGAATCCGGCCACGAGACCTAGAAGAATTCTTTTCTGCA
GTTGGAAAAGTCTGTTTGTTTCACTTTGGACAACTTTGAC
CCGTTTCCCCACTAAGCTTGGATTCTAATTGATTATGTTT
TTCTTTTAAGGTACGAGATGTGCGAATCATCTCTGACCGA
AACTCCAGAAGATCCAAAGGAATTGCTTACATTGAGTTTG
TGGATTCCACATCTGTACCCCTGGCAATTGGTCTATCTGG
ACAAAGGCTTCTTGGAGTACCAATCATTGTCCAGGCTTCA
CAGGCTGAGAAGAACAGAGCCGCTGCATTGGCCAATAACT
TGCAGAAGGGCAGCGCAGGACCCATGAGGCTCTATGTTGG
CTCATTGCATTTCAACATCACAGAAGACATGCTCCGAGGC
ATTTTTGAACCATTTGGAAGAATTGATAGTATCCAACTGA
TGATGGACAGTGAAACAGGACGATCTAAAGGATATGGTTT
TATCACATTTTCTGATGCTGAATGTGCAAAGAAGGCACTG
GAACAGCTTAATGGCTTTGAGTTGGCTGGTAGACCAATGA
AAGTGGGACATGTGACGGAGCGCACAGATGCCTCCACCGC
CAGCTCCTTCCTGGACAACGATGAGCTAGAAAGAACCGGT
ATTGATCTGGGGACTACAGGAAGACTTCAACTCATGGCCA
GATTAGCTGAGGGAACTGGTTTGCAGATCCCGCCCGCTGC
ACAACAGGCCCTTCAGATGAGTGGCTCCATGGTTGCCATG
GCTGCAGCTACTGCTGCTATGAACCCTGGATTGAGTTTTA
ACATCAATGTGCCAACAAACCAAGCCTTGAATTTACCATC
ACAACCCATCGCAACACACTGTTTCCAGCTGTCCAACATG
TTCAATCCAAACTCAGAAAATGATCATGGTTGGGAAATCG
AAATTCAGGATGATGTCATTGAAGAGTGCAACAAACACGG
TGGAGTCATACACATATATGTGGACAAGAAATCTGCTGAA
GGTAATGTCTATGTGAAGTGTCCCACCATTCCTGCTGCCA
TGGCTGCAGTCAGTGCGCTACATGGACGCTGGTTTGGAGG
TAAAATGATCACAGCAGCTTATGTCCCGCTTCCTACATAC
CACAACCTTTTCCCAGAGTCAGTGCAGGCCACACAGCTTC
TAATCCCCAGTCGTCGGTGATCAATCACCACTGTACAACT
CCACTTTTTCAGCCTTGCTCTTTTTAACTTTTGGACAATA
ATAACAGTTCTGCAAGTTGTGGCACAGGTGTGGTAAGGTA
AAGTTTCACTTGCATACTGTCCTTACAGGTCATGGACAAG
TTCTGTGGTTAAAAAAAATCCTATGTACAGCCTACTTATT
GAATTTTGCTTCTTGATCTTTTATTGTTGGTACATATTTG
TTTTTCTCTTCCACATTTATTGTCTCTGTGAAAGATCTGA
TTGGTATGTTTATCACTCGAGGTAGTGTATAATAATACCA
GAAACGCAGTATAAGTAAGTCTTGGATTCAAACTCTTCAA
TTTTGATCAAATGTCAACATATTCAACTTTTTGGCTCTAT
GAGCTGTGGGAACTAAATGGCTGACAAATATCTTTTGTTC
ATTTAGAGACCACGAGGTTTAGAAACATCTTGTTTTTCTA
ATCAAGATTTTGATTTTTGTAAAGTTCTTGATGAAAAGTT
CATTTCAAATAAAGCAGAGATAACTGAAATA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations