FIGURE

Figure 4

ID
ZDB-FIG-230122-32
Publication
Keseroglu et al., 2023 - Using single-molecule fluorescence in situ hybridization and immunohistochemistry to count RNA molecules in single cells in zebrafish embryos
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Figure 4

Surface creation and masking image

(A) Stitch ND2 raw image. One of the her1ci301;her7hu2526 mutant embryos is used as a repesentative sample.

(B) Converted stitched file to Imaris format.

(C) Select tissue format in every 5 slices using manual surface creation.

(D and E) Created surface to mask DAPI (nucleus) and FITC (membrane) channels.

(F) Use “Mask All” in the “Tab Edit”. Set voxel intensity outside surface to zero “0”.

(G) Masked tissue.

(H and I) (H) Use “free rotate” window to make image anterior-posterior view (I) from left to right.

Expression Data

Expression Detail
Antibody Labeling
Phenotype Data

Phenotype Detail
Acknowledgments
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