CRISPR

CRISPR3-foxj1a

ID

ZDB-CRISPR-190409-1

Name

CRISPR3-foxj1a

Previous Names

None

Target

foxj1a (1)

Sequence

5' - AAGGAGAACCGGGCAAAGG - 3'

Disclaimer

Although ZFIN verifies reagent sequence data, we recommend that you conduct independent sequence analysis before ordering any reagent.

Note

None

Genome Resources

None

Target Location

View all 5 target locations

Constructs

No data available

Genomic Features

Genomic Feature	Affected Genomic Regions
sq5717	foxj1a

Expression

Gene expression in Wild Types + CRISPR3-foxj1a

No data available

Phenotype

Phenotype resulting from CRISPR3-foxj1a

No data available

Phenotype of all Fish created by or utilizing CRISPR3-foxj1a

Phenotype	Fish	Conditions	Figures
olfactory pit ab1-tuba labeling absent, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}	standard conditions	Fig 2 from Rayamajhi et al., 2024
olfactory pit decreased size, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}	standard conditions	Fig 2 from Rayamajhi et al., 2024
olfactory pit lacks all parts of type multi-ciliated epithelial cell motile cilium, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}	standard conditions	Fig 2 from Rayamajhi et al., 2024
ciliated olfactory receptor neuron non-motile cilium assembly decreased process quality, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}	standard conditions	Fig 2 from Rayamajhi et al., 2024
olfactory epithelium decreased size, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}	standard conditions	Fig 2 from Rayamajhi et al., 2024
multi-ciliated epithelial cell differentiation decreased process quality, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}	standard conditions	Fig 2 from Rayamajhi et al., 2024
brain motile cilium absence of anatomical entity, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}	standard conditions	Fig. 5 from D'Gama et al., 2021
olfactory epithelium cnga4 expression decreased amount, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}	standard conditions	Fig 3 from Rayamajhi et al., 2024
olfactory epithelium ciliated olfactory receptor neuron poorly differentiated, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}	standard conditions	Fig 3 from Rayamajhi et al., 2024
olfactory epithelium has fewer parts of type ciliated olfactory receptor neuron 9+2 non-motile cilium, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}	standard conditions	Fig 2 from Rayamajhi et al., 2024
multi-ciliated epithelial cell motile cilium assembly decreased process quality, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}	standard conditions	Fig 2 from Rayamajhi et al., 2024
olfactory epithelium ompb expression decreased amount, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}	standard conditions	Fig 3 from Rayamajhi et al., 2024
sensory perception of smell decreased process quality, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}; jf4Tg	chemical treatment by environment: bile acid	Fig 4 from Rayamajhi et al., 2024
olfactory epithelium GCaMP expression decreased amount, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}; jf4Tg	chemical treatment by environment: bile acid	Fig 4 from Rayamajhi et al., 2024
sensory perception of smell decreased process quality, abnormal	foxj1a^{sq5717/sq5717}; foxj1b^{sq5719/sq5719}; jf4Tg	control	Fig 4 from Rayamajhi et al., 2024
vertebral column rotational curvature, abnormal	foxj1a^sq5717/+; gmnc^sq34/+; foxj1b^{sq5719/sq5719}	standard conditions	Fig. 7 from D'Gama et al., 2021
vertebral column increased curvature, abnormal	foxj1a^sq5717/+; gmnc^sq34/+; foxj1b^{sq5719/sq5719}	standard conditions	Fig. 7 from D'Gama et al., 2021
vertebral column rotational curvature, abnormal	foxj1a^sq5717/+; gmnc^sq34/sq34; foxj1b^sq5719/+	standard conditions	Fig. 7 from D'Gama et al., 2021
vertebral column increased curvature, abnormal	foxj1a^sq5717/+; gmnc^sq34/sq34; foxj1b^sq5719/+	standard conditions	Fig. 7 from D'Gama et al., 2021
vertebral column rotational curvature, abnormal	foxj1a^sq5717/+; gmnc^sq34/sq34; foxj1b^{sq5719/sq5719}	standard conditions	Fig. 7 from D'Gama et al., 2021
vertebral column increased curvature, abnormal	foxj1a^sq5717/+; gmnc^sq34/sq34; foxj1b^{sq5719/sq5719}	standard conditions	Fig. 7 from D'Gama et al., 2021

Citations