Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
23	34.0 cM	z13363	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
23	270.52 cR	Z13363	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
23	3698.0 cR	z13363	Goodfellow T51 (T51)	Geisler, Robert	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
guca1b	GENE	23		Brockerhoff et al., 2003	At the time of mapping on the LN54 panel, this marker was located 39.96 cR  ... At the time of mapping on the LN54 panel, this marker was located 39.96 cR from Z13363 on LG 23 with a LOD score of 7.4 (Brockerhoff et al., 2003).
erbb3b	GENE	23		Rojas-Muñoz et al., 2009
t23877	Feature	23		Rojas-Muñoz et al., 2009
cacnb3b	GENE	23	10.09 cR	Zhou et al., 2008	Zhou W et al (Dev. Dyn 237, 3842-3852) used the LN54 radiation hybrid panel to  ... Zhou W et al (Dev. Dyn 237, 3842-3852) used the LN54 radiation hybrid panel to map cacnb3b to LG 23, 10.09 cR from SSLP Z13363 (LOD = 10.9).

OTHER MAPPING INFORMATION

Chr 23 Brockerhoff et al., 2003 At the time of mapping on the LN54 panel, this marker was located 39.96 cR from Z13363 on LG 23  ... At the time of mapping on the LN54 panel, this marker was located 39.96 cR from Z13363 on LG 23 with a LOD score of 7.4 (Brockerhoff et al., 2003).   Chr 23 Rojas-Muñoz et al., 2009

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
AB	0,273		60.0
Forward Primer	CCTGTTTGTGTCTCCAGTGTG
Reverse Primer	CCTGTCACTGTTTTTCCTGAA
IND	0,185,155		60.0
Forward Primer	CCTGTTTGTGTCTCCAGTGTG
Reverse Primer	CCTGTCACTGTTTTTCCTGAA
TU	0,163,141		60.0
Forward Primer	CCTGTTTGTGTCTCCAGTGTG
Reverse Primer	CCTGTCACTGTTTTTCCTGAA
EKW	163,141,135		60.0
Forward Primer	CCTGTTTGTGTCTCCAGTGTG
Reverse Primer	CCTGTCACTGTTTTTCCTGAA