ZFIN ID: ZDB-GENE-980526-124

Mapping Details

Gene Name: ndrg family member 3a
Symbol: ndrg3a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 11 25,064,519 - 25,139,061 GRCz11
Ensembl 11 25,064,519 - 25,139,061 GRCz11
Vega 11 24,826,903 - 24,901,445 GRCv10
NCBI Map Viewer 11 25,064,536 - 25,139,061 GRCz11
UCSC 11 - GRCz11
Mapped Clones containing ndrg3a
CH211-25D12 Chr: 11 Details
CH211-274P22 Chr: 11 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa35087 11 25,122,422 GRCz11 Busch-Nentwich et al., 2013
11 24,884,806 GRCz10 Busch-Nentwich et al., 2013
11 26,055,981 Zv9 Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
5 250.1 cM ndr3 Mother of Pearl (MOP) Postlethwait, John H. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
ephb4a GENE 5 Ríos et al., 2011 Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
z34450 SSLP 5 Ríos et al., 2011 Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
zf232 Feature 5 0.3 cM Ríos et al., 2011 Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
pax8 GENE 5 Ríos et al., 2011 Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
usp39 GENE 5 Ríos et al., 2011 Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.

OTHER MAPPING INFORMATION
Markers Encoded by ndrg3a
MGC:63551 Chr: 5 Details
Primer Sets:
Strain Bandsize Restriction Enzyme Annealing Temperature [C]
SJD 126,120 36.0
Forward Primer GTATAGTAGTGTGTATGAGCATCTGG
Reverse Primer AGCTGACCCGCTC(A/C)GGTT