Mapping Details

Genome Browser Chr Position Assembly ZFIN JBrowse 7 30,326,184 - 30,367,650 GRCz11 Ensembl 7 30,326,184 - 30,367,650 GRCz11 Vega 7 30,055,034 - 30,096,500 GRCv10 NCBI Map Viewer 7 30,327,056 - 30,367,514 GRCz11 UCSC 7 - GRCz11

Mapped Clones containing aldh1a2
CH211-94N14	Chr: 7 Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
7	2980.0 cR	raldh2	Goodfellow T51 (T51)	Geisler, Robert	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
z8693	SSLP	7		Begemann et al., 2001	Begemann, et al. (2001. Dev 128:3081-3094.) report aldh1a2 corresponds to an  ... Begemann, et al. (2001. Dev 128:3081-3094.) report aldh1a2 corresponds to an EST (fb50h01) mapped between z11119 and z8693 on the LN54 mapping panel.
z11119	SSLP	7		Begemann et al., 2001	Begemann, et al. (2001. Dev 128:3081-3094.) report aldh1a2 corresponds to an  ... Begemann, et al. (2001. Dev 128:3081-3094.) report aldh1a2 corresponds to an EST (fb50h01) mapped between z11119 and z8693 on the LN54 mapping panel.
z9273	SSLP	7	49.0 cR	Grandel et al., 2002	Grandel et al. (2002. Development 129:2851-2865) report mapping aldh1a2 to LG 7 at a distance of 49 cR from the marker z9273, using the T51 radiation hybrid mapping panel. aldh1a2 mapped adjacent to EST fb50h01, which is a fragment of aldh1a2 near the 5' end.
fb50h01	EST	7	0.0 cM	Grandel et al., 2002	Grandel et al. (2002. Development 129:2851-2865) report mapping aldh1a2 to LG 7 at a distance of 49 cR from the marker z9273, using the T51 radiation hybrid mapping panel. aldh1a2 mapped adjacent to EST fb50h01, which is a fragment of aldh1a2 near the 5' end.

OTHER MAPPING INFORMATION

Chr 7 Begemann et al., 2001 Begemann, et al. (2001. Dev 128:3081-3094.) report aldh1a2 corresponds to an EST (fb50h01) mapped  ... Begemann, et al. (2001. Dev 128:3081-3094.) report aldh1a2 corresponds to an EST (fb50h01) mapped between z11119 and z8693 on the LN54 mapping panel.

Markers Encoded by aldh1a2
fb50h01 Chr: 7 Details

Genomic Feature i26 is an allele of aldh1a2

Marker Type Chr Distance Publication / Person Comments fb50h01 EST 7 Begemann et al., 2001 Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to  ... Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to demonstrate the nls mutant corresponds to a gene represented by an EST (fb50h01) mapped between z11119 and z8693 on the LN54 mapping panel.   z8693 SSLP 7 Begemann et al., 2001 Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to  ... Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to demonstrate the nls mutant corresponds to a gene represented by an EST (fb50h01) mapped between z11119 and z8693 on the LN54 mapping panel.   z11119 SSLP 7 Begemann et al., 2001 Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to  ... Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to demonstrate the nls mutant corresponds to a gene represented by an EST (fb50h01) mapped between z11119 and z8693 on the LN54 mapping panel.

Genomic Feature um22 is an allele of aldh1a2

Marker Type Chr Distance Publication / Person Comments z10441 SSLP 7 7.0 cM Alexa et al., 2009 Alexa et al. (2009.PLoS One 4(12):e8261) report mapping um22 to LG7, linked to  ... Alexa et al. (2009.PLoS One 4(12):e8261) report mapping um22 to LG7, linked to Z10441 and Z8693.   z8693 SSLP 7 Alexa et al., 2009 Alexa et al. (2009.PLoS One 4(12):e8261) report mapping um22 to LG7, linked to  ... Alexa et al. (2009.PLoS One 4(12):e8261) report mapping um22 to LG7, linked to Z10441 and Z8693.

Genomic Feature nz15 is an allele of aldh1a2

Marker Type Chr Distance Publication / Person Comments z8693 SSLP 7 0.14 cM Wingert et al., 2011 Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping. Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping.   z11894 SSLP 7 1.0 cM Wingert et al., 2011 Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping. Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping.   z1182 SSLP 7 3.04 cM Wingert et al., 2011 Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping. Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping.   z4999 SSLP 7 6.38 cM Wingert et al., 2011 Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping. Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping.

Genomic Feature i26 is an allele of aldh1a2
Chr 7 Begemann et al., 2001 Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to demonstrate the nls  ... Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to demonstrate the nls mutant corresponds to a gene represented by an EST (fb50h01) mapped between z11119 and z8693 on the LN54 mapping panel.