ZFIN ID: ZDB-GENE-990415-272

Mapping Details

Gene Name:	DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Symbol:	ddx4

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	10	6,884,123 - 6,905,574	GRCz11
Ensembl	10	6,884,123 - 6,905,574	GRCz11
Vega	10	6,925,423 - 6,946,874	GRCv10
NCBI Map Viewer	10	6,884,151 - 6,905,574	GRCz11
UCSC	10	-	GRCz11

Mapped Clones containing ddx4
DKEY-117I20	Chr: 10 Details
CH73-194F17	Chr: 10 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
sa6158	10	6,896,599	GRCz11	Busch-Nentwich et al., 2013
	10	6,937,899	GRCz10	Busch-Nentwich et al., 2013
	10	6,561,271	Zv9	Busch-Nentwich et al., 2013
sa9472	10	6,904,881	GRCz11	Busch-Nentwich et al., 2013
	10	6,946,181	GRCz10	Busch-Nentwich et al., 2013
	10	6,569,553	Zv9	Busch-Nentwich et al., 2013
sa15900	10	6,892,878	GRCz11	Busch-Nentwich et al., 2013
	10	6,934,178	GRCz10	Busch-Nentwich et al., 2013
	10	6,557,550	Zv9	Busch-Nentwich et al., 2013
sa18973	10	6,904,881	GRCz11	Busch-Nentwich et al., 2013
	10	6,946,181	GRCz10	Busch-Nentwich et al., 2013
	10	6,569,553	Zv9	Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
10	34.5 cM	vasa	Mother of Pearl (MOP)	Postlethwait, John H.	Data
10	29.6 cM	vasa	Heat Shock (HS)	Woods, Ian G.	Data
22	22.96 cM	vasa	Gates et al (GAT)	Talbot, William S.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
fb78a06	EST	10	9.0 cR	Bartfai et al., 2003	Bartfai et al. (2003., DNA and Cell Biology 22:47-54) report mapping vasa to LG10 approximately 9cR from fb78a06 on the T51 mapping panel.
fb78a06	EST	10	3.56 cR	Bartfai et al., 2003	Bartfai et al. (2003., DNA and Cell Biology 22:47-54) report mapping vasa to LG10 approximately 3.56cR from fb78a06 on the LN54 mapping panel.

OTHER MAPPING INFORMATION: No data available

Genomic Feature sa6158 is an allele of ddx4