Genomic Feature

sa6158

ID
ZDB-ALT-161003-18042
Name
sa6158
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation
Protocol
adult males treated with ENU
Lab of Origin
Stemple Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Point Mutation
Variant Location
Chr 10: 6896599 (GRCz11) (1) Details
Nucleotide change
T/A
Variant Notes
Predicted truncated Vasa protein lacking critical functional domains –including  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
T>A (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GCGATTTCAACCAAAATAAGCAATTACACCCTATCAAACATATCTATAATAAGGAGCATGGTTGGTTACGGAGTTATTAACGCCACAAGACCAAACTAGGAAAGGATGGACTTTGAAGGAATAAACTATGGCAGGAAAGCTTCATTAAATTGCACTGAACAAGTTCTGGCCATGCATGCTCGAGGCAGGCAATTCCGTACAATTGCGTAATTTAGCAGCTTAAATTTATCGAGCTAATTATGACATCGGACCCATAACAATAAACTTAAAAGTAGCATTTATTGGCTGATAAACGATATGACCGTCTATATCTTGCATCCCTAAAATTAATCTATTTCTTTGACTACTGTTCAGGTTTTAGAGGCCGGAATGAGGAAGTATTTTCCAAGGGTAATTTACTGCATTTATATAAAATGTTCTAAAGTGTTAACTTTTTTTTTTATTATTATTTAATCCATTTTATTGTTTTCCTGTTTGTTCAGTCACAACTGCAGACAAGT
T/A GGATCAAGAAGGAAGTGAAAATGCAGGTGGGCAATATGTTATACATAAAGTAATCATCATGTTAAAATTGATTTAAGGAATTGGGGAGGAAGTAGAATTGATGGTCTTTAAACGAATTGTCTCGTAAATTGCTAAATTTTATACAAGAAGTGTTTTCCATAGTTTTTGGAGCTGACTTGCAAAAGATCAGATACAATTTAAGGACTGATTTAATACCAGACATTTTAATCATGGTGTTTGAGTCTTTTTGCTCTTAAATGACTGATATTAAAGAGGAGGAGAGAGTTGTAGTTTGAAGTGATAGATTTTCATCTGATAAAGTATTGCTTCAAGTAAATTGAATGGCCTTTTTTTTTTCAGGACCCAAGGTTGTTTATGTGCCGCCGCCTCCTCCAGAGGAGGAGAGCTCGATATTCTCCCATTATGCAACAGGCATTAATTTTGACAAATATGATGATATTCTTGTGGACGTGAGTGGCAGCAATCCTCCAAAAGCAATT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations