ZFIN ID: ZDB-GENE-080102-2

Mapping Details

Gene Name: choline O-acetyltransferase a
Symbol: chata
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 13 29,409,359 - 29,421,331 GRCz11
Ensembl 13 29,409,359 - 29,421,331 GRCz11
Vega 13 29,278,909 - 29,290,881 GRCv10
NCBI Map Viewer 13 29,407,973 - 29,421,355 GRCz11
UCSC 13 - GRCz11
Mapped Clones containing chata
CH211-222I16 Chr: 13 Details
CH211-232K3 Chr: 13 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa22323 13 29,419,342 GRCz11 Busch-Nentwich et al., 2013
13 29,288,892 GRCz10 Busch-Nentwich et al., 2013
13 29,642,944 Zv9 Busch-Nentwich et al., 2013
sa31935 13 29,417,054 GRCz11 Busch-Nentwich et al., 2013
13 29,286,604 GRCz10 Busch-Nentwich et al., 2013
13 29,640,656 Zv9 Busch-Nentwich et al., 2013
sa45487 13 29,644,375 Zv9 Busch-Nentwich et al., 2013
tk64 13 29,419,308 GRCz11 Joshi et al., 2018

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION
Genomic Feature tf247 is an allele of chata
Chr Location Mapped As Panel Mapped By Scoring
22 11.4 cM tf247 Boston MGH Cross (MGH) Geisler, Robert Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
Genomic Feature tk64 is an allele of chata
Chr Location Mapped As Panel Mapped By Scoring
13 46.2 cM tk64 Boston MGH Cross (MGH) Geisler, Robert Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
Genomic Feature tf247 is an allele of chata
Marker Type Chr Distance Publication / Person Comments
z17223 SSLP 13 Wang et al., 2008 Wang et al. (2008. J. Neurophysiol. 100: 1995-2004) report mapping the bajan  ...
Genomic Feature tf247 is an allele of chata
Chr 13 Wang et al., 2008 Wang et al. (2008. J. Neurophysiol. 100: 1995-2004) report mapping the bajan (tf247) mutant to LG13  ...
Genomic Feature sa22323 is an allele of chata
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