ZFIN ID: ZDB-GENE-000822-3

Mapping Details

Gene Name: homeobox C11b
Symbol: hoxc11b
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 11 2,180,072 - 2,185,174 GRCz11
Ensembl 11 2,180,072 - 2,185,174 GRCz11
Vega 11 2,121,848 - 2,125,699 GRCv10
NCBI Map Viewer 11 2,180,006 - 2,183,981 GRCz11
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa35003 11 2,181,607 GRCz11 Busch-Nentwich et al., 2013
11 2,124,129 GRCz10 Busch-Nentwich et al., 2013
11 2,171,676 Zv9 Busch-Nentwich et al., 2013
sud124b 11 2,180,168 - 2,180,178 GRCz11 Yamada et al., 2021

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
hoxc13b GENE 11 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13b, hoxc12b, hoxc11b, and hoxc6b are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG11.
hoxc12b GENE 11 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13b, hoxc12b, hoxc11b, and hoxc6b are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG11.
hoxc6b GENE 11 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13b, hoxc12b, hoxc11b, and hoxc6b are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG11.
mir196c MIRNAG 11 Yekta et al., 2004 Yekta et al. (2005, Science 304(5670):594-596) mapped mirn196a.2b between hoxc6b and hoxc11b.
hoxc6b GENE 11 Yekta et al., 2004 Yekta et al. (2005, Science 304(5670):594-596) mapped mirn196a.2b between hoxc6b and hoxc11b.

OTHER MAPPING INFORMATION
Chr 11 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13b,  ...
Chr 11 Yekta et al., 2004 Yekta et al. (2005, Science 304(5670):594-596) mapped mirn196a.2b between hoxc6b and  ...
Genomic Feature sa35003 is an allele of hoxc11b