ZFIN ID: ZDB-GENE-990415-110

Mapping Details

Gene Name: homeobox C10a
Symbol: hoxc10a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 23 36,083,617 - 36,086,594 GRCz11
Ensembl 23 36,083,617 - 36,086,594 GRCz11
Vega 23 35,984,814 - 35,987,791 GRCv10
Vega 23 35,982,622 - 35,989,431 GRCv10
NCBI Map Viewer 23 35,969,446 - 36,086,900 GRCz11
UCSC 23 - GRCz11
Mapped Clones containing hoxc10a
DKEY-81P22 Chr: 23 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa44032 23 36,086,271 GRCz11 Busch-Nentwich et al., 2013
23 35,987,468 GRCz10 Busch-Nentwich et al., 2013
23 36,137,815 Zv9 Busch-Nentwich et al., 2013
la028560Tg 23 36,141,745 - 36,141,755 Zv9

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
hoxc11a GENE 23 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc4a GENE 23 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc6a GENE 23 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc8a GENE 23 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc5a GENE 23 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc9a GENE 23 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc3a GENE 23 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc13a GENE 23 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc1a GENE 23 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc9a GENE 23 He et al., 2011 He X et al (Zebrafish 8(1), 1-8) placed the mirn196a-1 gene between the  ...
mir196a-1 MIRNAG 23 He et al., 2011 He X et al (Zebrafish 8(1), 1-8) placed the mirn196a-1 gene between the  ...
mir196a-1 MIRNAG 23 Yekta et al., 2004 Yekta et al. (2005, Science 304(5670):594-596) mapped mirn196a.2a between hoxc9a and hoxc10a.
hoxc9a GENE 23 Yekta et al., 2004 Yekta et al. (2005, Science 304(5670):594-596) mapped mirn196a.2a between hoxc9a and hoxc10a.

OTHER MAPPING INFORMATION
Chr 23 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a,  ...
Chr 23 Yekta et al., 2004 Yekta et al. (2005, Science 304(5670):594-596) mapped mirn196a.2a between hoxc9a and  ...
Chr 23 He et al., 2011 He X et al (Zebrafish 8(1), 1-8) placed the mirn196a-1 gene between the hoxc10a and hoxc9a genes on  ...
Genomic Feature la028560Tg is an allele of hoxc10a