Gene
hoxc6a
- ID
- ZDB-GENE-990415-113
- Name
- homeobox C6a
- Symbol
- hoxc6a Nomenclature History
- Previous Names
-
- hoxc-6
- hoxc6
- etID228114.23 (1)
- ZF-61
- zgc:101882
- Type
- protein_coding_gene
- Location
- Chr: 23 Mapping Details/Browsers
- Description
- Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in anterior/posterior pattern specification. Predicted to localize to nucleus. Is expressed in several structures, including ectoderm; mesoderm; nervous system; pectoral fin; and somite. Orthologous to human HOXC6 (homeobox C6).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 31 figures from 15 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7140528 (11 images)
- eu620 (17 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR001827 | Homeobox protein, antennapedia type, conserved site |
| Conserved_site | IPR017970 | Homeobox, conserved site |
| Domain | IPR001356 | Homeodomain |
| Domain | IPR020479 | Homeodomain, metazoa |
| Family | IPR050296 | Antennapedia-type homeobox |
| Homologous_superfamily | IPR009057 | Homedomain-like superfamily |
Domain Details Per Protein
| Protein | Length | Antennapedia-type homeobox | Homedomain-like superfamily | Homeobox, conserved site | Homeobox protein, antennapedia type, conserved site | Homeodomain | Homeodomain, metazoa |
|---|---|---|---|---|---|---|---|
|
UniProtKB:P15862
|
231 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
hoxc6a-201
(1)
|
Ensembl | 757 nt |
Interactions and Pathways
No data available
Plasmids