Mapping Details

Genome Browser Chr Position Assembly ZFIN JBrowse 23 36,095,260 - 36,097,488 GRCz11 Ensembl 23 36,095,260 - 36,097,488 GRCz11 Vega 23 35,996,457 - 35,998,685 GRCv10 NCBI Map Viewer 23 36,095,306 - 36,097,769 GRCz11 UCSC 23 - GRCz11

Mapped Clones containing hoxc9a
DKEY-81P22	Chr: 23 Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
23	105.1 cM	hoxc9a	Heat Shock (HS)	Woods, Ian G.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
hoxc1a	GENE	23		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc13a	GENE	23		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc3a	GENE	23		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc5a	GENE	23		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc10a	GENE	23		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc11a	GENE	23		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc4a	GENE	23		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc6a	GENE	23		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
hoxc8a	GENE	23		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.
mir196a-1	MIRNAG	23		He et al., 2011	He X et al (Zebrafish 8(1), 1-8) placed the mirn196a-1 gene between the  ... He X et al (Zebrafish 8(1), 1-8) placed the mirn196a-1 gene between the hoxc10a and hoxc9a genes on LG23.
hoxc10a	GENE	23		He et al., 2011	He X et al (Zebrafish 8(1), 1-8) placed the mirn196a-1 gene between the  ... He X et al (Zebrafish 8(1), 1-8) placed the mirn196a-1 gene between the hoxc10a and hoxc9a genes on LG23.
mir196a-1	MIRNAG	23		Yekta et al., 2004	Yekta et al. (2005, Science 304(5670):594-596) mapped mirn196a.2a between hoxc9a and hoxc10a.
hoxc10a	GENE	23		Yekta et al., 2004	Yekta et al. (2005, Science 304(5670):594-596) mapped mirn196a.2a between hoxc9a and hoxc10a.

OTHER MAPPING INFORMATION

Chr 23 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a,  ... Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxc13a, hoxc11a, hoxc10a, hoxc9a, hoxc8a, hoxc6a, hoxc5a, hoxc4a, hoxc3a, and hoxc1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG23.   Chr 23 Yekta et al., 2004 Yekta et al. (2005, Science 304(5670):594-596) mapped mirn196a.2a between hoxc9a and  ... Yekta et al. (2005, Science 304(5670):594-596) mapped mirn196a.2a between hoxc9a and hoxc10a.   Chr 23 He et al., 2011 He X et al (Zebrafish 8(1), 1-8) placed the mirn196a-1 gene between the hoxc10a and hoxc9a genes on  ... He X et al (Zebrafish 8(1), 1-8) placed the mirn196a-1 gene between the hoxc10a and hoxc9a genes on LG23.

Markers Encoded by hoxc9a
wz13644 Chr: 23 Details