Genomic Feature

ci1017

ID
ZDB-ALT-240111-14
Name
ci1017
Synonyms
  • acorn worm (aco) (1)
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
ENU 
Lab of Origin
Waxman Lab
Current Source
Other Pages
Notes
Comment Citation
unlike the previously reported nr2f1a alleles made by targeted genomic editing,  ... Gafranek et al., 2023
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 5: 49745315 - 49745372 (GRCz11) (1) Details
Nucleotide change
TCGACTCCGGTATTTTGAATGTATTGACCATTTTTGCTTCTACTTTTTTCCCTATGA/CACTGAAAAAAAT
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
13 bp inserted / 58 bp deleted in 5' UTR (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ATCTCCGTTTCGGAAACATTGCTCCGCTGGTACTCCCGTTAAAACGCATTCTTTTTGGGTCTCTGCTTCTTACATATTCCATTAGTTGCTTTTTTTCTTTTCTTTTCCTACTGGAGAGGTGAAACTACATAGCCAGTCGGGCGACGTTGCTTTTTTTCGCTGGACCAGATGAGCTTTATTCATGAACATAGATAGAGAAATCCGTTCTTCAGTGTTTCCTCCTCTCCAACCGCGAAGACGGAGAGAGGAGCAAGGAAGAAAAAAGAGGGGAATTTATTTTGCACAGCACTTTGGATCTGCGGTCCACCAGAAAGCTATTATTTTTGCTTCAACGTGAAGATTTTGTTTTTTACTGCGGTATTTTTTAAGAAAACTGTTTTTTTTTATATTACGTCTGGGATCGCTTTCTTCATTCACGATTGGGTTCCCGAATGGCTGACTGCAATTTACCTTGGAACTGGCCTCCCGACAACTGCATATCCTGATCGGGTGCCTTTCTA
TCGACTCCGGTATTTTGAATGTATTGACCATTTTTGCTTCTACTTTTTTCCCTATGA/CACTGAAAAAAAT GATTGAGTGCTCCGATTTGAATTCGCGCTGCCGTTCGTCCAAGACTTCCCTTTTCCCTGCTCCGATATCCGAGCGACCAGTTCGCTTGAAAGCACTTTTCGGGCCCGAGATATGGCAATGGTAGTTAGCGTCTGGCGAGATCCGCAGGAAGACGTGGCTGGAGGACCTCCGAGCGGCCCCAATCCAGCAGCTCAGCCGGCGAGGGAGCAACAGCAGGCGGCGTCAGCGGCACCACACACTCCGCAGACCCCCAGTCAGCCAGGACCTCCGTCCACACCAGGGACGGCTGGCGACAAGGGCAGCCAGAATTCTGGACAGAGTCAACAGCATATAGAATGTGTTGTTTGCGGGGACAAATCAAGCGGCAAGCACTATGGTCAATTCACCTGCGAAGGATGCAAAAGTTTCTTCAAGAGGAGTGTCCGAAGGAACTTAACATATACATGTCGTGCCAACAGGAACTGTCCTATTGACCAACACCATCGTAATCAGTGCCAATA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations