Genomic Feature

chb6

ID
ZDB-ALT-231201-3
Name
chb6
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Burns Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 6
Variants
Variant Type
Small Deletion
Variant Location
Chr 6: 321454 - 321455 (GRCz11) (1) Details
Nucleotide change
AA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp deleted in Exon 3 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ATTAAACAAGCAAAATAATCTGCCGATGGGGGAAGCAGAATCAGCTCATGTCAAAGCAAACGCAGGATTATTCCACTTCCCCTGTTGACAGATTATTTAGCATATTTTAAGATCTAAACTCTTCATTTTGACTCATTCTTTCTGAAAACACCACTACCTGTTTTGCTTGTCTTGAAAATGCTTCTTGATTTACAACTTTTGAGACATTTGCATTAGAAACAAGACTAAAACTCTGTGTCACTGCACTGAAAGACTGAAATACCGCTTCACAAATTGTATTGTACATGAATCTTGTGCAAATCATTCCATTTAAAAACTGCATAAGTATATATTTTCACATTTCTGCACATTTACAGTACATAAATACTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTTTTATTATTTTTTTAGCAATTTGGAAAGATTCTGGATGTGGAGATCATCTTCAATGA
AA/- GGGGCTCAAAGGTAAGAAACCGTTTTTAGTTGCTTGTTGAAAATGTCATCAGACTATATTCAAGTTAACTGCATTGACAATGACCCAAATAAATAGTTGCAGTTGTGTAATTAGGTGCTAATTTACACTATCAACCTCCAAAACTCGTCATATTGTAGATTATAATCCAAATAAAAGTGTTTTGTGCATTTCAGAAGCAATTTCATGCTAACGGTCTAATCTGATTCAATTCATTATACTAAGTTAAGCTAAAAACAACCCTGCCAGAACAAGTAATCAGCTGAATTGATTCGACAGTGGTTCAGGTCACCTGCACACTGCACAAATGCTTTTCCGACTGGGAGTTTTTATCTTGATTCTGAATTTTCATAAATCAAGATGAATTAGATGCAACAAGCTGCATCACAAAATAAAGCTTAAAACAAGCAAAATAATCAGCCAATTTAAATGCAAAAACCAGTATCCCCCGGTATCAGATTATTTGACGTATTTTAGGAATG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
rbfox2chb6/chb6; f1Tg/f1Tg; s896Tg/s896TgComplex
rbfox1lchb5/chb5; rbfox2chb6/chb6Complex3 figures with image from Huang et al., 2022
rbfox1lchb5/chb5; rbfox2chb6/chb6; chb7Tg/chb7TgComplexFig. 6 with image from Huang et al., 2022
rbfox1lchb5/chb5; rbfox2chb6/chb6; f1Tg/f1TgComplex3 figures with image from Huang et al., 2022Fig. 2 with image from Huang et al., 2022
rbfox1lchb5/chb5; rbfox2chb6/chb6; fb18Tg/fb18TgComplex2 figures with image from Huang et al., 2022
rbfox1lchb5/chb5; rbfox2chb6/chb6; s896Tg/s896TgComplexFig. 2 with image from Huang et al., 2022
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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