Genomic Feature

hu13685

ID
ZDB-ALT-210504-3
Name
hu13685
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Bakkers Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 2: 23170559 - 23172604 (GRCz11) (1) Details
Nucleotide change
TGACGAATTGATTCGCCCCAATTTCTCCAAGGCCGTAAAGTCGAGAAGTTGAAAGCAGAGGTTATCAGTACTGCAGGCCTAGAGCTTGAACAGGTCTACATTTGACAGCAAAAAACATTTAAACTTTATCGTCTTTTGCCAACTGATAGCCTATGCGCTTATAGGTCTATAAGGTGATCTTCAGTTCGGCTATATGGTTTCTCTCATTCATATTTTGAATGCAACACTTCAGCAGTCCTGTCTAAAATGTTGGCTAAATTATTTAACAAAATAACTAGGCAACATGAATAAACATATTAATGAAACACAGAGGCCTAAATGCATTCGCACGATGCTTAAAATCGTGTTGCTGAAGGCCTAGTTGTACTATTTAGTCCGACGGAAAACACGCTGTTATTATTTAGGCTAGGCCCCTTAAAATTAATTTCGTTTTAATTAGTATTTCGGTTGACGAAAAAATACCTTAAAAGTGAGCTTTTTAAAAATTCAAATCAACATAGTTTTAGTCAAATAAACAAGACTATTTGGTTTGATTCATGGTTGCATGATCACTTGTTTACAGCAATTTCCATAAAGTTTTAAATAGAGTAATACGATAGTAACTTTAGTACGATAGTAAATTATAGTTTTTTAAGTAATATATCTTTTAAAACGTAGTTGAACTATTTTTTCGAATCACATTCAGAAAGATAGCTGATGCATCCATTGCATTTTTGAGCATTCAAATGTTTTTACTATTATGCATTTTGCAGATGTTTTATTGTTTTCTATACTGAGAAGTAAATATTAAATAAATAGAAATTGGCCTACTGAAATTTAACAGACTCTCTCGACTTCCGTACATGCATTAGACTAGTAGGCCTACTAGAAGTCTGCAAAAGTAATATACTTTTAATTTTATTTAATAGATAAAGATATTTTATTTTAACAAGCTTGGATATCGAAGAATATATTTGCTACATTTTACGTTGGCTTATTTTTAAACGGCCTATTTTTAAACGTGTATACCGTTGGAATAGTCTATAACATTTTGAAACACTTCCATTAATTAAAGTAAATTGGTAAACAAACGCATATAGGGTAAACGAAGAAGAATGTGTTTTCATTCTCACTGTGTCCCTACAGAATAGTGCATGTCAAAAAAATGACCCTCATATTGGTGCATGTCATTGTCATGCATTTGCTAATGTGATAATCACATCTATTACTGCATGTGCTATCAACAATAGATAACAATCAATGTATATTAGCATGTACAAATTATTTGTAAATATATTTCCTTTTTTAGGAGATCCTAAATTGCCTGCGTAATTTAAGAAGTGGCTACACTTTTCCATTTTTCCCCTGTGTGACTTTTGAAGTTTAAATCTTCCTTTGCTATGAAAAAATATATAATTTGGAAAGCCCATTGACTATAATCCAGATTCTCCTTTTTTTTTTTTAAGGCTCGTATTTTGTTCTCCAGCACTTACTCTCCTGCTGTGTAGTGTCGCTCCCGCTGGTGAGTCCCGGAGACTCCAGCATACTCCTGCCCGCCTCCCCTGCGCTTTCCTCCGCTTGAGCTCCCACCATCTCCCGCGCCTCCTCCAGATCCAACAGGTGGCTCACGGAGAAGTTCTTTTTAGCCTGTAAATGATCCTGATTCGCGGTGATCGCAGTCTCCAGTCGGTTTGGTAGTGTGGCTTGTCTGTCCATTACATGAGCATAGCTGGAAGTCATGACGCAAATTGACGAAACCCAAGATATCCTCTACCTACAACCAACATGGGTTACGTTTCGACCATAAACAACCACTCTATACTCGACAAATTTATCGATTTCTGTTTTTACATCCGTAGATCGGCGTCTTGTGAATCCAAAAAAGGCGTATTTGCTAGCTCTCTTTTATTTGACAATCGCGCGTCTTCATGGGAAACTGCATCACAGAACAAACATCTCCAGTTCAAGAGCTCCAAAGTTTCCAAAGTTTTGCCGATGACTCCACTCTTAACTCTGCAGCAGAGACTTTCCCCTCTCATTCCCAGAGTGAGGGAATGAGTAAACTGG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2046 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
GATTTTTATACAGAATTTTAGAGAGATTTTAACTTCGTGTTTATGATGTTTGCTGCTTTGGTCTGCAAAACAGATTTAATTTTAAAGATTTTTTTACATGTAGACTACAGAACAATAAATTATTAATGTGTAAATATTTTAGGTTCTCCAGTCTTATTTTTCTCTTGCATAAATTAAATTGCACCAAAAGAAATGGAACATAAAAGGACGAAATTATACAGTTATTTTTAATATACAGATTTTGTTAAATTGCCTGAAAAAAAGTTTAACAGTCTCTTATATAAATTGTCTTCTGTACTTTTGCTTCTTTATCCTACTTTTTCTTTCTATAGTTTGTGGCTGATTTAGAGGTAAATGCTAATTATAATATCTAGGCCTTTTTTTTTTTGGTGTAGGAAAAATGCAAATCGTTGTAGACTTGCTACTTTCTGGATGCATCAATCAGTTCTTAAATCGCCCCATAAAACCTCCCGGAGAGAAGTAGAGAGAAAACACCACAG
TGACGAATTGATTCGCCCCAATTTCTCCAAGGCCGTAAAGTCGAGAAGTTGAAAGCAGAGGTTATCAGTACTGCAGGCCTAGAGCTTGAACAGGTCTACATTTGACAGCAAAAAACATTTAAACTTTATCGTCTTTTGCCAACTGATAGCCTATGCGCTTATAGGTCTATAAGGTGATCTTCAGTTCGGCTATATGGTTTCTCTCATTCATATTTTGAATGCAACACTTCAGCAGTCCTGTCTAAAATGTTGGCTAAATTATTTAACAAAATAACTAGGCAACATGAATAAACATATTAATGAAACACAGAGGCCTAAATGCATTCGCACGATGCTTAAAATCGTGTTGCTGAAGGCCTAGTTGTACTATTTAGTCCGACGGAAAACACGCTGTTATTATTTAGGCTAGGCCCCTTAAAATTAATTTCGTTTTAATTAGTATTTCGGTTGACGAAAAAATACCTTAAAAGTGAGCTTTTTAAAAATTCAAATCAACATAGTTTTAGTCAAATAAACAAGACTATTTGGTTTGATTCATGGTTGCATGATCACTTGTTTACAGCAATTTCCATAAAGTTTTAAATAGAGTAATACGATAGTAACTTTAGTACGATAGTAAATTATAGTTTTTTAAGTAATATATCTTTTAAAACGTAGTTGAACTATTTTTTCGAATCACATTCAGAAAGATAGCTGATGCATCCATTGCATTTTTGAGCATTCAAATGTTTTTACTATTATGCATTTTGCAGATGTTTTATTGTTTTCTATACTGAGAAGTAAATATTAAATAAATAGAAATTGGCCTACTGAAATTTAACAGACTCTCTCGACTTCCGTACATGCATTAGACTAGTAGGCCTACTAGAAGTCTGCAAAAGTAATATACTTTTAATTTTATTTAATAGATAAAGATATTTTATTTTAACAAGCTTGGATATCGAAGAATATATTTGCTACATTTTACGTTGGCTTATTTTTAAACGGCCTATTTTTAAACGTGTATACCGTTGGAATAGTCTATAACATTTTGAAACACTTCCATTAATTAAAGTAAATTGGTAAACAAACGCATATAGGGTAAACGAAGAAGAATGTGTTTTCATTCTCACTGTGTCCCTACAGAATAGTGCATGTCAAAAAAATGACCCTCATATTGGTGCATGTCATTGTCATGCATTTGCTAATGTGATAATCACATCTATTACTGCATGTGCTATCAACAATAGATAACAATCAATGTATATTAGCATGTACAAATTATTTGTAAATATATTTCCTTTTTTAGGAGATCCTAAATTGCCTGCGTAATTTAAGAAGTGGCTACACTTTTCCATTTTTCCCCTGTGTGACTTTTGAAGTTTAAATCTTCCTTTGCTATGAAAAAATATATAATTTGGAAAGCCCATTGACTATAATCCAGATTCTCCTTTTTTTTTTTTAAGGCTCGTATTTTGTTCTCCAGCACTTACTCTCCTGCTGTGTAGTGTCGCTCCCGCTGGTGAGTCCCGGAGACTCCAGCATACTCCTGCCCGCCTCCCCTGCGCTTTCCTCCGCTTGAGCTCCCACCATCTCCCGCGCCTCCTCCAGATCCAACAGGTGGCTCACGGAGAAGTTCTTTTTAGCCTGTAAATGATCCTGATTCGCGGTGATCGCAGTCTCCAGTCGGTTTGGTAGTGTGGCTTGTCTGTCCATTACATGAGCATAGCTGGAAGTCATGACGCAAATTGACGAAACCCAAGATATCCTCTACCTACAACCAACATGGGTTACGTTTCGACCATAAACAACCACTCTATACTCGACAAATTTATCGATTTCTGTTTTTACATCCGTAGATCGGCGTCTTGTGAATCCAAAAAAGGCGTATTTGCTAGCTCTCTTTTATTTGACAATCGCGCGTCTTCATGGGAAACTGCATCACAGAACAAACATCTCCAGTTCAAGAGCTCCAAAGTTTCCAAAGTTTTGCCGATGACTCCACTCTTAACTCTGCAGCAGAGACTTTCCCCTCTCATTCCCAGAGTGAGGGAATGAGTAAACTGG/- CGAGGAAGGTTTGATGGCACAGATGAAGGATTTACGCCCAATGGTAGGAGGCCGGACGAGCTTCTCTCAGCTTCTTTCTC  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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