Genomic Feature
sh543
- ID
- ZDB-ALT-201102-4
- Name
- sh543
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- van Eeden Lab
- Current Source
- Other Pages
Notes
| Comment | Citation |
|---|---|
| The 11 bp deletion in exon 3 is predicted to to be a true null. | Marchi et al., 2020 |
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 14: 23765844 - 23765854 (GRCz11) (1) Details
- Nucleotide change
- CTTTCCACCAG/-
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 11 bp deleted in Exon 3 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TAAAACGTCTGTGTAAAACAACTAAATCTTTTCCCCTTTGAACACAATATATTTTATTTTAAAAAACATGTTTTAGAGCAGTAAACATGTCAGGCTAAATAATTCAAATAAATCATTGACTTTAATTAGTTTCTAAAACACAGATTTCTTTACAATTTAAAACGACATGCTTTTCCGCAGGTGATACTGTTGTCCTAAAAATATGCAAATAAAAAATCTAACATATACCTTAGAAACATTATAGCTGAATATTTTGGCAATTTTAAAACCTTGACTTTTCCAAACTGCGGTAACCCTTGAAAACGATTATAGTCTCATCCCTATACTCAAGATGGACTTATAAAAAGAGAATGCATAGTAAACACATTAATGCCAGAGATATATGGAATACCTTCAACAGCCCTTTTAAAGAAGACTTTACAGCTTCCGCAAGTGAGAACTCCATAATGGCAGCCAGAAGCCTCATCTGAGCAAACCAGACAGATCTTGTGTGTGCCAGT
CTTTCCACCAG/- CTGACGATGTGGCAGTGCTGTCTTCAGGCCTGAAACAATCAGAAATATCTATCTTTTAATGTCCAGGAATATTATAGTGCTATCATTTTGAATATTGAACTGAAATGTACACTGCTGCCTGAAAGTTTGGGATCAGTAAAATTAGGGCAGGGCGATTTATCGAAAAGTAATCAAAATACACATTCAGAAACTATAATCAGTCAAAACATTTTTCAGGTGAATTTTTTCCAATTATTTTCCATACCATGTGTGGAGTCACGTGACCCCGCTTTAAGGCTAATTTCTACTTATTATATCATGATTTACACGTATTATATTATTCTGATACTATACTTCAGCCAAGTGCATGCCTATGGTCCGGTGCAGCCTCCGCATACCCATACACCTCTCAAAAAAAGAAATGTAACTACATGCAACAATGATGCGTAACGCAAGCTTTGTAATTGGTCGGTTTGGTAGCTGTGTCGAGGGTGGGGTGGACGGTGCAGAGAGCCGCATTT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None