Genomic Feature

mi604

ID
ZDB-ALT-200325-2
Name
mi604
Synonyms
  • D8 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Cunming Duan Lab
Current Source
Other Pages
Notes
Comment Citation
Trpv6 mutant protein lacks the six transmembrane domains and the critical ion  ... Xin et al., 2019
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 16: 12312277 - 12312284 (GRCz11) (1) Details
Nucleotide change
GCTCCGGG/-
Variant Notes
Trpv6 mutant protein lacks the six transmembrane domains and the critical ion  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CCTTACAAACTCCACTTAACCCACCTTTAAATCCACCAATTCCAGTAAACCACTGGTTGCTAAACGTAACAGTATCCCACTTCAACAACATTTTGCAATACAACATGACCACAATATGGACATTATACCTAACAATTATTCTTTATTCCATGCATGTACCATATAGTAGCTAACAGAGTGTGACCATACGAACAATAGCTAAAAATGATTACCACAATAGAAGCATATGTCTCACCATAGTAAAACAGGCCTTCTCTTCTTTTGCGGAAGTACATGCCTGTGACTCTGGGTGTCGTCACATCAGCTCCTCTTTTTATCATCTCCCAGATTAAGTTAGGATTCTGATTAATCACAGCGATGTGAAGGGCTGTTAAACCTGTCAATCAGAGCACACTTGCTTAAGATTTTACAGTGTGAACAGTCATATTTAATTGTTTGAGGAAGTGTCTGTTTCTAATAATGACCATGGTAGAGTTCAGATGTCATGGGCTCGTTGATGA
GCTCCGGG/- GCTCCATTCATTAAAGCCACCGCTGCTTCAAAGTTATCATTCATCACAGCAACATGCAGAGCTGTCTCTCCAAGCTCACCTGCAACAAACACACACAATGTCAGAGACACATTTACAATCTGTATTTATCATTCAGTGCATTGTTAGATATTAAGACATTAAAGCAACGTTCTGTCATGAAACCGCCATGAAACGAAGGCTGTAAGTCCTATCCAGTTTGCTTCTAACCATATTGTTAAATAAGGCGCAGGTGAGCAGCCAATGGGCTTGCTTCTCAATATTTAAATATCTTGTATTATTTGGAATAGCAATCTACAGTACGTTTTTGGGATAGCTGTCTGAAAATTAAGTTAAAATAAGTGAAGATAATCCCTAAATTTAATCCTTTTGCTGATCTGCTCACTGTTTTAAGTAAGCACTCATACATTTAAATTCAGGCTCCATGTTTACAAGTTTCAGACTGATCTCACGAGGAAACGTAAGTATTTTACGTTTTGTCA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations