Genomic Feature

uq38bh

ID
ZDB-ALT-200123-2
Name
uq38bh
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with
Lab of Origin
Hogan Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 20
Variants
Variant Type
Insertion
Variant Location
Chr 20: 22235602 - 22235603 (GRCz11) (1) Details
Nucleotide change
-/GA
Variant Notes
2-bp insertion at amino acid 175 in exon 5
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp inserted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TTGAAATAAGGGATTACTTGCAGATTTAGCCCTACTCTAAATTAATTTAAGATTTTTTTGTAATGTTGAAATATATTTTTTATGAGAGAGAGAGAGAGATTTGATTTATTTTAGTGTCCTTAAGGAGCTAATGCAATTATTTATGCAATAACTTTTATTTGAAATGCAGAAAATGTTATTGTAATTATTTTTTTATTTTTTGCTAAATATATCTATACAGAATTTTTTTTTTAGTCAACATTTATTTTGTTTCAAGTAATTCATTTTAAGTTAAGTGTTAGGTATATAACTCTGAATCTTAATACTTTTGAACAGCTATGTTGTAAAACACTGTCACATGGCAACATGAGCAATCTATAACAAATGTAACATGTAACAATATGAAATATTTAGCTGTTAACTCATCAAGATTCCTATCTATTGGTGTTGATGATATGATGTGAAAAGTATGTTTCTGGTGGTTGTCTTTGACAGAAGTATCCAGTAAAAGAACTGTCCACT
-/GA GATGGGAAAGAGGTGATCTGGGATAGCAGGAGGGGCTTCATCTTGCCCAGTCGTGTGGTCAGCTATGCTGGAGTCGTCTACTGCCAAACCACTATTCGAAACGAGACCTTTCAGTCCTCACCTTACATTGTGGCTGTTGTAGGTAAGAAAACAAGACAGTTAATTTATTTGTGTAGGTAAACAGTGCATGAAAAAGTTCCATAGTCGGAAATAAGAACATGTACACTACCGTCATTGAAATATTTTTTAATGTTTGGAACACGTCTTTTCTGCTCACCAGGACTGTATTTATTTGAACAAAAAACACAATAAAACAGTAACATTGTGAAATATTATGCTTAATACTCATATTATATTTACTCTCGAAGTGCAGTACAGACGTGTAAACACCTTAATCAAACTATTACTGTTGTGTAGGATTTACGCTGCATTTTGTGACAGGATAGTCAATACACACATGGCTGTTTGAAACTTTTCTCTGCACCTCCCGAGTCAGTGAAG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
kdruq38bh/uq38bhHomozygous♀+/- ♂+/-
kdruq38bh/+Heterozygous♀+/- ♂+/-
kdruq38bh/+; nz101Tg; y7TgComplex2 figures with image from Vogrin et al., 2019
kdruq38bh/+; y7TgComplex
kdruq38bh/uq38bh; nz101Tg; y7TgComplex2 figures with image from Vogrin et al., 2019
kdruq38bh/uq38bh; y7TgComplexFig. 5 with image from Vogrin et al., 2019
flt4hu4602/hu4602; kdruq38bh/+; nz101Tg; y7TgComplex2 figures with image from Vogrin et al., 2019
flt4hu4602/hu4602; kdruq38bh/uq38bh; nz101Tg; y7TgComplex2 figures with image from Vogrin et al., 2019
flt4hu4602/hu4602; kdruq38bh/uq38bh; y7TgComplexFig. 5 with image from Vogrin et al., 2019
flt4hu4602/+; kdruq38bh/+; nz101Tg; y7TgComplex2 figures with image from Vogrin et al., 2019
1 - 10 of 12
Show
Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.