Genomic Feature

ihb370

ID
ZDB-ALT-191107-4
Name
ihb370
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Zhan Yin Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 2
Variants
Variant Type
Small Deletion
Variant Location
Chr 2: 25278699 - 25278705 (GRCz11) (1) Details
Nucleotide change
CCCGCGG/-
Variant Notes
between 2741 bp to 2747 bp of the wild-type ppp2r3a coding sequence, CCCGCGG,  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted in Exon 3 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
CCCGGAGCAGCTCATGTTTCGCAGGGCTGCGAACCCGTTGGCTATGGACTTGTGTTGAGATTTTGTGTTTTGTAGTTTCGAAGGGCAATCAGGAGGCTGGCGGCCTGGCCTCTCTGGTACAATGCTTCTGGATTCCAGCCGGCACAGTACCAGGCAAGATTCTAGGAATTGCATTGTGTGCCAAGACACATCCACCTTGCATCCCTGGACAAAACCTTTCCAATGAGAGTTTTGAAGTGAGCGGACCGCTGGGAGAACAAGTGTACAAGGAACACTGGCCAGAACGGAGTTCTCTGCAAGCTCCTGAACGGAGACTGACCCACCTTGACGGAAGTCCCTGAGGACATACTTTGGGAGTTGCTTGTGCATTTTGTTGTTGTATTTTTTGTGGGCTTCTTCTCATTTCTCACTTTTTGAGTCCTTTGACATTGCAAATATGATGATCAAGGAGGCCTCGTTAAGGGAAGATCCCGACTTGCGGGGTGAACTGGCCTTTTTGG
CCCGCGG/- ATGTGACTTTGTCCTTCCATCACGTTTCAAGAAAAGGCTCAAATCTTTCCAGCAAGCCCAGGTCAGTAGCCAACCTCTGTAGTTCTGCAAATAATACCATGGCTAACTCTCACATGCCAGACAAGACAAACTATTCACAGGCAGATACCAACGTGTTTATTAATAGGACAGTGGAAGGGGGTGAGATAGAGATAGAGGAATACAGTGTCCAAGTGTTGCGTACTGGAACTTTTGCATGGGAAGGGGGAGGGAGTGGACAAGACGGGCCAGGCCAGGCTTGAGCCACAGCTGCTCTCTTCAATGCATTCATGTGGGCCTGTCCTGCTTGCTGTTTTCATCTTCAAAATTTTTGTCACACTTCAACAGCTCTGTTTCTGTTTGATTGACAGTAAGACTGTGCTGTTCAGAAATAAGCTGCCTTAGGTGTACACTATGAATCTACAGTTTTGCCCAGAGACCAGAATAAGAACAGTATGTCAAGACTATGTATAGAATGTTTT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
ppp2r3aihb370/ihb370Homozygous♀+/- ♂+/-4 figures with image from Song et al., 2018Fig. 6 from Song et al., 2018
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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