Genomic Feature
ch3
- ID
- ZDB-ALT-190703-4
- Name
- ch3
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one insertion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Robert Ho Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Insertion
- Variant Location
- Chr 5: 23152473 - 23152474 (GRCz11) (1) Details
- Nucleotide change
- -/GCTA
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 4 bp inserted in Intron 1 (1)
- Transcript Consequence
- Splice Site, Intron Gain of Intron 1, Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
GACATATTATTTTTTTCCTCCTAGAAACGCTTTTCCTAAGCAATAATGCGCTCTTGATCTATCCTAAAATTATCCGTCGAACGCAAAATAGCTTAAACCGCTTAATTTTATTAAACCTAAATATAACAAATAATTATACAAATAATTTAGATTTTAAATGAATTTAAACGCATGGCTTGTTTTCAGCCTTTTTAAAACAACATTATGAGTTTGGGGGATTATTGTTTTTGGTTCATATCTGAAGATCAGCTGGTTGAAACATTCATGCATTCATTTTTTTAATGCGCATCTTCCAGTCCACCGTAATTGAACTCAGACGGGAATATGGCGAATCCAATGTTCGAATCTCTACGGGCATGTTCCGGTGGCAATTCCCCCGCGATGGATTTCGAGAGGGATAAGGATTCAGGACATCACGGACGGAACAAAACCGGCTCCCCGCCACTACAAACTCAGCTCTCCCAACAGGTCAGCCATAAATGTGTGCAGCCTGCTCGAGTA
-/GCTA TACAAGACGAAATGATAAAAAAAAAAAATATGATGATGATGATGATGATGATTATTATTATTATTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAATATTAATATTATTTGGCCGTCACTGGTTTTCTCGTTTGTTTGTTTTTTAGGTAGCCTATGTTAGCCTATCCACACATAGGCTATTACAAGTGAATTAGTAATGTTTACTATAGTTATAGCAAAGACATTTTGTATAGCATCATATTCATTAATATAGGTGTGTATTTTAATAATTTATGTAGAACCTACCTATATGCTTCGTTCTACATAAATAATTTAAAAAGGGTGCCAAAAATAAGGCTTTGGCAAGTGTATATTAAATGTTAAGCTGATGCGCAAATCGTTTAATTTACTTTTAAATTCGATGCTGTTTTATTTAAAGTAGTTATTGTTTGTACTAATTAACGCATTATTTCTATATAAAAAAATC - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None