Genomic Feature

ups6

ID
ZDB-ALT-181024-19
Name
ups6
Synonyms
  • delta4 allele (1)
  • p.H49VfsX11 (1)
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Blader Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 14: 36226757 - 36226762 (GRCz11) (1) Details
Nucleotide change
CACACG/GT
Variant Notes
The predicted truncated protein lacks the homeodomain and downstream  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp inserted / 6 bp deleted (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TGTGTGTGTATGCAAGTGGATATAATATCACATACCTGTCCCTGTCACTCTGGCTCTCCTTGCTCTCGGCTGAAACCGAGATATCTTTTACCCAGTCGAAACGGGAAAAAAATCTTTCCTTAACACTGGGCTTGTTTAATCATATTTTTTTATTATTAAAGCCGTTTCAGGAGTGTCGCTTTTAGTGGTTTAAATGAGAAAGGAGCACTGGCAACGCTTGCCGATACTTCACTGCTGGACACATTCGTTTCTTTCTTTCTTTTATTTCTTTTATTTATTTATTTATCTGTATTTGTGACCTGCGCTGAGGAAGTTATAGCTGCTTGCGAGCCGTCGGTAAATCGCTTGTCTTATCCATGACCTCTATGAAGGATCCGTTGAGTTTGGACCACCATCATCACAATCACCACGTTACCGGGAGTAAACACGCGCCGCTTTCGATGGCCTCTAGTCTGCAACCGCTTCAGCGGTCTGTGGACTCGAAACACAGGCTGGATGTG
CACACG/GT GTTTCAGACACCTCCAGTCCAGAGTCCGTAGGTAAGACCTGAGGAGATTTTTAACTTGAGTGTTTTTGGTTTTGGTGTCAGCTATCATTAAGTGTTCTTCTCGAGAAATAAACATTTTAAAACTTCGCTCGGTGTGAAAACAGAGTGGGTTAGCCGACAGAGCGAGCCATGTAAATATATCAAGAGGTGGAACAGGCAGTTGATTCGTAGGGCTATTGAAATGAGCTACATAAGTCATACCCTTTGACAGGACTTTATTTACTTAAATTGTTTGTGAAAATGTGGGCTTCACGAATGTTTACACAGTGGCAACTGCGCTTTGTACAGAATAGAGCAAACATTCCCAAACTACAATGTCATTGCTTTCGTGTGATAAAAAAATGCATGCTGCATTTATGGCGGTTAAAATATTTTCTAAATCCTGCATTAGCATTTGAACATTGAATTTTTACCGGTACTGTTGGCTTTGCCAGAAAAAAGGATGTTAGGATGTTAAAACG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations