Genomic Feature

ihb20180620

ID
ZDB-ALT-180620-1
Name
ihb20180620
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Xiao Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 15
Variants
Variant Type
Small Deletion
Variant Location
Chr 15: 25517732 - 25517739 (GRCz11) (1) Details
Nucleotide change
CATGATGG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ACCCTGTTGGATGTGACGACAGTAAAATATTGCCAAAGCAGAATAAGATGAACATACTGTATGTAACTTATACACACTGTAGTCAGCACAAAACAAATATAATTTACCCACGTTTAATGCGTTCTGTGCTGCATTTCTTACATTTACAGTTTTGCTCGAAGAGTTCAGTATGTTAACATTTGGAAACACTTTGCTAGATTTTACCAAGATAAAGGGGAATTTGTTACAAAATACTGTAAACAACCCCCAAACTAACCAAGTACGATTATATTTAGTTATATTTGTTTTTAGTTTACCTCATTCACATAATTTAAAGTAATTCTTTTTGTTTTTTTCCTTCTGTGGTTTATCTCCCCATTAAAGCACACTTTTGAGGTATTTTTGGATTTTGTCAAACAAATAAATTAGCATTAGGACATTATGCAGGTAACTAATATATTTCTACAGAACTCACCAGATTGGATCAAGCGGTTCATGCGCAGATAGCTGAGTGTCACCCT
CATGATGG/- CAGCTTTGTCCAGGTGGGAGGCGATACGTCGTGGAAGGGGTAACGAATGAGCGAGCTCATAAAACACCTCCGTCTCCTGACTCCTCCTACAGCGCGCCGCGTCACGCGAACGCACCTTCCGCTGCTCCAAACTGGGCCTAAATAAGAATGAAAACAAAAAATAAAGAAATAAAATTATTTAATAACGACTAGATTTCTAATAGTCCAACAAGGCAAAACAGGAGGAAAAACGTAATTGAACTTGTATAAACACGATTATTTCAACTGTTTCCACTGTTTTTCTTCAACCAAAACTTAAAAAGACAACAACAGAAAAACACATTCCATTCCCTCTGCGTCTTACATCTTGGTTTCTCTTCAATAATGTTGTCCCGGCAGTAATTAGTGTGTTCTGGTGCTTTGTGTATCCTAGAGCCTTGTCAAAAAAAGTCCATTACAAACTTGAAATGAAGTCAGGGGGAAGCCTTTCACTCGCACTCCCCTCCTCCACTGGTTTTAAG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
hif1alihb20180620/ihb20180620Homozygous♀+/- ♂+/-2 figures with image from Cai et al., 2020Fig. 3 with image from Cai et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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