Genomic Feature

b1308

ID
ZDB-ALT-180418-2
Name
b1308
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Stankunas Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 7: 21773064 (GRCz11) (1) Details
Nucleotide change
G/-
Variant Notes
The predicted truncated protein lacks the JmjC domain.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp deleted in Exon 14 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AGGAAGAGAAAGGCAGTGACGCTGAGGAGGATAATGATGAAAAGCCCACCACTAAAGCGGAAAGTACAACCAGTAACTCTTCGGCACCCAACTCCAGGTAATTTGTCGCAAAAATTAACATGGCCATTAATTTCTGAATTAGTCCTTTTTTTATTTATTTATTATATAATAAAAACTGATTTAATGAAATCTGTAACAACAACCTTCTTAAATGCATGCGTGTATGAATTTATATTAGTTGAATGGTTTTCCCTAAAACGGTTTCATTGTATTTACAGTTCAGAGCAGAAAACTGTGGGGAAAATAATTAAATTTGGCACAAACATTGACCTGTCTGATCCCAAAAGGTAAGACCATTGTGCATTATTGTGTAAACCGGTAAATATGGTACACTCTAGGGCACTATGTATTAACTACATTGTATTGCATCTCATGGTTTAGATGGAAGCCTCAGCTGCAGGAACTGCAGAAGTTGCCAGCATTTATGCGCGTATCCTCCA
G/- TGGGAATATGCTAAGCCATGTTGGCCACACCATTTTGGGAATGAATACAGTACAACTATATATGAAGATTCCTGGATGCCGCACACCAGGTTTGAGACTATCTCAAATAAGAGTTGTGGTAAATCAATAATAGATTTTTTTTTTTTTATTCATGTTAAATTTCACGTTTCTTGTCTTCAGGACACCAGGAGAACAACAACTTCTGTTCTGTTAACATCAACATTGGACCTGGAGACTGTGAGTGGTTTGCTGTCCATGATGACTACTGGGAGGCCATCAGTGATTTTTGTCAGAAGTGAGTAACTGTGCCGTTCAAAATCTGTCTTTGTAAACCACAGGAGATATTTTGAGTCTGAAATCTGTCAAAAAAATACATTAATAGCAAACAATGTCTAAATGTTAACATTTTCTCTCTTTCAGACATGGAGTGGACTATTTGACGGGTTCATGGTGGCCAGTTCTGGATGACTTGTATCGCGCTAACATCCCTGTGTACCGTT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations