Genomic Feature

z34

ID
ZDB-ALT-171114-2
Name
z34
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Grunwald Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 5
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 42282323 - 42282330 (GRCz11) (1) Details
Nucleotide change
CCAGCTGC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TAATTTTCCTTCGGCTTAGTCCTTGTGTTCATCAGGGGTTGGTACAGCGGAGTAAACCGCCAACTTATCCAACATATTACACAGCGGATGCCCTTCCAGCTGCAACCCAGTACTAGGGAAGCACCCAGCCACACTCATTTACACATACACTATGGTCAATTTAGCTTATTCAATTCTGCTTAAATATCACATTTATGAAAATGTAAATGCTCAAATAGTGAAAAAAGGATTCATTTTTACACTTGAATTATAAATAAACCTTTGTGACATTGGTCCAGTGAAATATTAGTTTGCAAATATGTATTTATTTTCAAGCTGGAATAGTGTATTGATATATTTATGAATGTATAAAAAAGATGCTGTGAATCATTCATTTGCTGAATAGTTATGGGCTCATGGACTTCACAATCTCAATGCACATAATGGAGGATGCTGCAAATATGTGATGACTAATTGTTATGGTGTGTTTCCGGTGTGCTTTTATTTCAGACGGATGTTTC
CCAGCTGC/- AAAGTAACAGTGACAGGACTAAATCCAAAAGTCAAGTATGTGGTGATAATGGACATGGTGCCGTTTGATAACCACAAGTACAAGGTACCTCCCCTCCACACACACACACACACACACACACACACACACACACACACACACGGGCATATTTCTGTTTAACAGAGAGCAGATTTTCTCAACACATTTCTAAACGTAATAATTAAAAACTAATTTATAATAACTGATTTATTTTATCTTTGCCATGATGACAGTTAATAATATTTGACTAGATGTTTTTTAAGACACTTCTTTACAGCTTAAAGTGACATTTAAAGGCTTAACTAGGTTAATTAGGTTAACTGGGCAGGTTAGGGTAATTAGGCAAGTTATTGTATAACGGTGGTTTGTTTTGTAGACTATCAAAAAAAAAAAAAAAAAGATAAAATAAAGGGCTAATAAATTTTGACCTTAAATAAAAAAAAATGCTTTTATTTAAGCCAAAAGAAATCAAATAAGACTTT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
tbx16lz34/z34Homozygous♀+/- ♂+/-Fig. 1 with image from Morrow et al., 2017Fig. 4 with image from Morrow et al., 2017
msgn1fh273/fh273; tbx16lz34/z34ComplexFig. 2 with image from Morrow et al., 2017
tbx6te314a/te314a; tbx16lz34/z34ComplexFig. 4 with image from Morrow et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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