Genomic Feature

zf679

ID
ZDB-ALT-170228-2
Name
zf679
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 20
Variants
Variant Type
Small Deletion
Variant Location
Chr 20: 908782 - 908797 (GRCz11) (1) Details
Nucleotide change
TGTACTGCAGGCCGGA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
16 bp deleted in Exon 1 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CAGAAAAACGTTAGGGCTGTCTTTTCGGTGAAAGACGTGAAAGTCTAGGAAGCTGTAGACGAATATAACACTGCCGAGGAGATCAGCGATGGCTAAGCTGCCAATGAAGTGGTAGGACGGCCTGCAGCGCAGCGTACGCGACTGCAGAATCACACACAACACCACCAAATTCTCCAACACCGTAAACGTCCCCAGAGTTAGAGATAACACCGCTATGGCTAGCTGCTGACTGGGAGTCAGTATCATGAAGCACTCCATATCCATAAAGTTCTCCCCGCACTGCAGACTGCCGTCTTCAGCATGGCTCCAATTACCGAAAACATCAGAGCTGTTAGTGGGATAAAAGGGGAGACCTTTGACGATCAGCTCCTCATCTGGGGCTACTTTATCCGCGAAGGAGCTTCTGCGGTAGGCTGCGAACGGCTTGGGCAGAGGGTATCCGCTTTTGGAGAAGTCTCCGTCAATAATGTGGTCGTCGTAGCCGATGTCATTGGAGCCGA
TGTACTGCAGGCCGGA/- GGTGATGGTTCTGAAGGTGGTTTCCGCCACTCCGTCCAGGACAGATTTAACATCGGACTTTGAGGCCGGGAACAGCATGGTCAGAGATGCTCTAGAGGAAACCTGTCGGAGGAAATGGAGAGAATGACTACGCTTACATGGACATCAGCGATCAAATTATTCAACTAAATCTGAATGAGGCAATGATATGACTAAAGGGGCAGTTCACCTAAAACTGAAAATTCTGACATCATAATTTGCTCCAAACCCAAAAGTAGATCTGTTGAAGAAAGAGAGAACTTTCATTGACTTCCATAGTATTTGTTTTCCTGCAATGGAAGTCAGTGGTTACAGGTTTTAAGCATTCTTTAAAATATCTTCTCTTGCGTTCAACAGAAGAAAGAAACACATTAAGGTTGAGGGAGAGTCAATAGTGAGCAGCTTTTGATTTTTGCGTGAACTATCCTTTTAAGGTGCTTATATGAGTTGCTTTTTGATATTCCTTTCATGCTCCCTGTTTG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
cnr1zf679/zf679HomozygousUnknownFig. 5 from Luchtenburg et al., 2019
cnr1zf679/zf679 (TU)Homozygous♀+/- ♂+/-6 figures with image from Liu et al., 20165 figures with image from Liu et al., 2016
cnr1zf679/+ (TU)HeterozygousUnknown2 figures with image from Liu et al., 2016
cnr1zf679/zf679; as3TgComplex3 figures with image from Liu et al., 20162 figures with image from Liu et al., 2016
cnr1zf679/zf679; cnr2zf680/zf680 (TU)Complex2 figures with image from Liu et al., 2016Fig. 1 with image from Liu et al., 2016
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 2 of 2
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