Genomic Feature

ck112a

ID
ZDB-ALT-170119-6
Name
ck112a
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with
Lab of Origin
Cheol-Hee Kim Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Insertion
Variant Location
Chr 15: 43799421 - 43799422 (GRCz11) (1) Details
Nucleotide change
-/T
Variant Notes
protein truncated in the EGF-like somain
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp inserted at position 78 in Exon 1 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation: at position 98 (1)
Sequences
Flanking Sequence
GTGTGCACGTGTTTATTATTTGTGTGTGCATTTACTGTGTTTATTAAATTCATGTGCAAGTGTACGTGTTTAAAAGTGATTATGTGTGTTTAAGTGTGTCTATGTGTTAATAAAAGTGTTTGTGTTTAGAAATTTTTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGAGAGAGAAAGAGAAAGAGAGAGAGAGCATGTGAATGGGGGGTGTGTCTTTGTGTGTGATTGAGAGAGTGTGTGCGTAAAGGGGGCTCTCCAGCAGTGTGTAAAGCATCTCCAGCAGAGTGTAAAGCCTCTCCGGTGTGTGTAAAGCCTCTCCGGTGTGTGTAAAGCCTCTCCGGTGTGTGTGAAGCGTCTCCGGTGTGTGTGAAGCCTCTCACTCTCCTCGACTCTTCATCATCATGTCTCTCCATCTCCTCCTCTTCTTCTTCCTCCAGCTCTTCAGCTCGTCTCTCCAGCAGTTCCCCCGAGTCTGCACCTCC
-/T CCAGAAGTCCTCCAGTCCAAACGCTGCTGTCCAGTCTGGCCCGGCGACGGCTCCGTGTGCGGCGTCCAGTCAGGTCGAGGGTTCTGTCAGGACGTCCTGGTGTCCGACCTTCCCAACGGGCCGCAGTATCCTCACTCAGGAGTGGACGATCGAGAGCGATGGCCTTTAGTGTTTTACAACCAAACCTGCCAGTGCGCCGGAAACTACATGGGGTTTGATTGCGGCGAATGCAAGTTCGGCTTCTTCGGTGCCAACTGCGCAGAGAGACGCGAGTCTGTGCGCAGAAATATATTCCAGCTGTCCACTACCGAGAGGCAGAGGTTCATCTCGTACCTAAATCTGGCCAAAACCACCATAAGCCCCGATTATATGATCGTAACAGGAACGTACGCGCAGATGAACAACGGCTCCACGCCAATGTTCGCCAACATCAGTGTGTACGATTTATTCGTGTGGATGCATTATTACGTGTCCCGGGACGCTCTGCTCGGTGGGCCTGGG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations