Genomic Feature

fu48

ID
ZDB-ALT-160413-4
Name
fu48
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Lecaudey Lab
Current Source
Other Pages
Notes
Comment Citation
fu48 has a single-nucleotide deletion in yap1, resulting in a frame-shift and  ... ZFIN Staff
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 18: 37351470 - 37351474 (GRCz11) (1) Details
Nucleotide change
ACGGT/-
Variant Notes
fu48 has a single-nucleotide deletion in yap1, resulting in a frame-shift and  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AAAAATTGCAGTTTACACAGAGTTGATAATGGTAGCATTTTTCAAAAACCTGCCATTTTTTCAAACATTTGCACTTCAAACTGCCTTCATCATGTAAATGAACTGCCAAAATACATAAAAACTAGTCATGTAAAAAAGTGACACCTCAAAGTCTAATTGAAAGACAAGTTTCCACTTCTAAAATGACCAGCAGCATTTCAGACTTAACCCCATTCTAAAACTTACCAAAACAAATTAATCACCCCTAACCCATGATGCTGTAGTACGCGTTATATCAAGCAACATTAACAACTCACTTTAGGAAGTATCTCTGTCCCGAAGGGGTCTTGGCCATCTCCCAGCCTGGGGGCAGCGGCATGTCATCAGGTATCTCGTAAGAGGACTGGCGGAGGTGCTGAGGTGGGGCGTTTGCTGGACCCATGCTGGTCAGTGCACCAGGAGAAACTGCGCCCAGCTGCAGGGAGGCAGGTGAGGAGTGTGCCCGGACGTGATGGGGCGTG
ACGGT/- ACCAGCAGTACCTGCATCTGTACTGGCCTATACGGGGATAGAGGATTAGTTTAGCATAAAGAAAACATTTAGACTAGGATTGGATTTAAAGCAAATACCCCACAGGCAATAATTCTCTCAAACAGAGAACAGACTTATGACTAAACCTAAATAATTTGCACAATTTGCTCTCTTGCTTTACTCTCCCTCAAGTGGTTCCAAACTTTTATAAGTTTCTTGAACACAAAGTAAGTTATTTTAAATGTTAATTATGTCAGAAAGCTGTAACCACTGACCTCCATGGTATTTGTTTTTTCTACTATTGAAGTCAGTGCTTACAGGTTTTTAAAATGTCTTCTTTAATGTTAAATAGAAAGAAAAAAAATCTCAAACAGGTTTGTGATAATTAAAGAGTGAGTAAATGATGACAGAACGCTCAATTTTTGATGAAGTGTCCAATTAAAGTCAACAATTTGTTTGAAAACATTCATTTCGACTTTTTTCAACTAGTCTATGAGATT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations