Genomic Feature

y448

ID
ZDB-ALT-160323-4
Name
y448
Synonyms
  • lnx2aD70 (1)
  • lnx2aΔ70 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Dawid Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 24: 21671346 - 21671415 (GRCz11) (1) Details
Nucleotide change
CACACCAAATCATCATCCACTTCCAAACGATAGTTATAAAGGTGGTTCTCCCAGGTGCGGTGAATCTGTC/-
Variant Notes
The lnx2aΔ70 mutation has a frame shift early in the protein coding  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
70 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TCTATAAAAAGCTGTTCGCCATTTCTTATTTTGGCCAATCTAAACAATTATAAACAACATAAAATATACACATTTTGATGTTCTGATTGCAGTTCCTATGTAAAAGAACCACTTCCTGCCCTCTATCTGAATTTCATGCAACATCAATGGCATCAGATAAAAATAACCTAATGCTCGAGTACCAAAACATTGACATCAAATAGTGCTTATTTGAGTCTGAATATTTGTCTTGAGAACTTTACCTGTGTTTGAGATGTGCCTCCAGGTCGCAGCGAGGCATGCTGAGCGAGCAGGAGGGCGTGAGCGGACAGGTGACCGACAACTTGTCCAGCAGCTTGTGCACCAGAATGCTGGAGCGCCGGCAGACCTGCAGCTGCAGATGCGCACGGTCCAGTGGACAGAAGTCCCGTTCCTGCAGGAAGCTGCGCAGACAGCGGGCACAGAAGGTGTGGCCACATGGTGTATCCAGGGGCTGAACTAACGGCTGAAGGCAGATGTGG
CACACCAAATCATCATCCACTTCCAAACGATAGTTATAAAGGTGGTTCTCCCAGGTGCGGTGAATCTGTC/- CACATTCAGAGCAAAGGGCCTCCAGAAGAGCTTCGCTCACCATGCCCGGGTCCACTCCCTCTCCCAGACTGCCCATTGCTCTCGGCTTTGGCTACACTCACTCAGTCCATCCCGCGGGCGTCAGAGGCTGTGCGACTCCGGCAGGGGACGACCACCCCCTGGCAGGCACAGTGACATCACTCTGAAGGGTGGCAGAGAAACAGTGAGGTAACTATTGTGAATGAGAGACAGTGTTTGTGTGTGCCAGGATGAGATTATGTTGCAGAGCAGTGTGGGTTTACTCCTGCACATTAATCTGGCAGTGTAATCTCATGCTCTCTCGCCTAGAGAAATCTTTCAATCCCGCAGAGAGAGAATTATCCAGGATTGAGGCAGGGAGCACCGAGTCAAGAGGTTTTCATGTGAAAGTGAGAAAAGGAGGGGCAAGAGAAGACGACGAAAAACAGATGCTGTGTAAGATTCCAATGGAGAGCACTTGTTCATAAAAACCAGAGCGGAAG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations